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Protein
Submitted name:

Aerotolerance-related membrane protein

Gene

batB

Organism
Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi97 – 971CalciumCombined sources
Metal bindingi99 – 991CalciumCombined sources
Metal bindingi101 – 1011CalciumCombined sources
Metal bindingi170 – 1701CalciumCombined sources
Metal bindingi198 – 1981CalciumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciBFRA272559:GKF0-2448-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aerotolerance-related membrane proteinImported
Gene namesi
Name:batBImported
ORF Names:BF9343_2419Imported
OrganismiBacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343)Imported
Taxonomic identifieri272559 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000006731 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272559.BF2500.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JDUX-ray1.47A85-296[»]
ProteinModelPortaliQ5LCG5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2304.
HOGENOMiHOG000277368.
KOiK07114.
OMAiEEKIWFW.
OrthoDBiEOG63587V.

Family and domain databases

Gene3Di3.40.50.410. 1 hit.
InterProiIPR024163. Aerotolerance_reg_N.
IPR002035. VWF_A.
[Graphical view]
PfamiPF07584. BatA. 1 hit.
[Graphical view]
SMARTiSM00327. VWA. 1 hit.
[Graphical view]
SUPFAMiSSF53300. SSF53300. 1 hit.
PROSITEiPS50234. VWFA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5LCG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFRFEEPAYL YLLLLLPLLA AFYLYSNYRK RKAIRKFGDP VLMAQLMPDV
60 70 80 90 100
SKYRPDVKFW LLFTAIGLFA VLLARPQFGS KLETVKRKGV EVMIALDISN
110 120 130 140 150
SMLAQDVQPS RLEKAKRLIS KLVDGMENDK VGMIVFAGDA FTQLPITSDY
160 170 180 190 200
ISAKMFLESI SPSLISKQGT AIGAAINLAA RSFTPQEGVG RAIVVITDGE
210 220 230 240 250
NHEGGAVEAA KEAAKKGIQV NVLGVGLPDG APIPIEGSND FRRDREGNVI
260 270 280 290 300
VTRLNEAMCQ EIAKEGNGIY IRVDNSNSAQ KAINQEINKM AKSDVESKVY
310 320 330 340
TDYNEQFQVI AWMILLLLLV EMLILDRKNP LFKNIRLFSN K
Length:341
Mass (Da):37,969
Last modified:June 21, 2005 - v1
Checksum:i3CE6FA92CA2B4F1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR626927 Genomic DNA. Translation: CAH08200.1.
RefSeqiWP_010993034.1. NC_003228.3.

Genome annotation databases

EnsemblBacteriaiCAH08200; CAH08200; BF9343_2419.
KEGGibfs:BF9343_2419.
PATRICi21041544. VBIBacFra29119_2506.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR626927 Genomic DNA. Translation: CAH08200.1.
RefSeqiWP_010993034.1. NC_003228.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JDUX-ray1.47A85-296[»]
ProteinModelPortaliQ5LCG5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272559.BF2500.

Protocols and materials databases

DNASUi3288979.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAH08200; CAH08200; BF9343_2419.
KEGGibfs:BF9343_2419.
PATRICi21041544. VBIBacFra29119_2506.

Phylogenomic databases

eggNOGiCOG2304.
HOGENOMiHOG000277368.
KOiK07114.
OMAiEEKIWFW.
OrthoDBiEOG63587V.

Enzyme and pathway databases

BioCyciBFRA272559:GKF0-2448-MONOMER.

Family and domain databases

Gene3Di3.40.50.410. 1 hit.
InterProiIPR024163. Aerotolerance_reg_N.
IPR002035. VWF_A.
[Graphical view]
PfamiPF07584. BatA. 1 hit.
[Graphical view]
SMARTiSM00327. VWA. 1 hit.
[Graphical view]
SUPFAMiSSF53300. SSF53300. 1 hit.
PROSITEiPS50234. VWFA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343Imported.
  2. "The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines."
    Fan Y., Tan K., Bigelow L., Bearden J., Joachimiak A.
    Submitted (FEB-2013) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.47 ANGSTROMS) OF 85-296 IN COMPLEX WITH CALCIUM.

Entry informationi

Entry nameiQ5LCG5_BACFN
AccessioniPrimary (citable) accession number: Q5LCG5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: July 22, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.