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Protein
Submitted name:

Putative lipoprotein

Gene

BF9343_2622

Organism
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBFRA272559:GKF0-2658-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative lipoproteinImported
Gene namesi
ORF Names:BF9343_2622Imported
OrganismiBacteroides fragilis (strain ATCC 25285 / NCTC 9343)Imported
Taxonomic identifieri272559 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000006731: Chromosome

PTM / Processingi

Keywords - PTMi

LipoproteinImported

Interactioni

Protein-protein interaction databases

STRINGi272559.BF2707.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GBSX-ray2.48A/B25-223[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG82134.
HOGENOMiHOG000291263.
OMAiKIAIDMS.
OrthoDBiEOG6B3650.

Family and domain databases

InterProiIPR025921. HmuY.
[Graphical view]
PfamiPF14064. HmuY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5LBW5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRKAILFCLA ITLLGTMLIS FSACNGILSS LYDEPETAKD FGFITIDHAN
60 70 80 90 100
HSGTVRVDAT QYTKWNYINL HTLQIDSAKV TAEGADDPDT WDLAIHRYDV
110 120 130 140 150
KTNGGEVLET DYQSLSALKN AGSMPQGIFV ADEWTTNKIA VDVSHMMEDN
160 170 180 190 200
GYLIYAPSDF NPELSKWLNV DTSEMPPIYT PSNKVYLLRM KDDTMAAIRL
210 220
VSYMNAAGIK GYMTFDYIYP YEP
Length:223
Mass (Da):25,015
Last modified:June 21, 2005 - v1
Checksum:i29B807D48F33739A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR626927 Genomic DNA. Translation: CAH08403.1.
RefSeqiYP_212324.1. NC_003228.3.

Genome annotation databases

EnsemblBacteriaiCAH08403; CAH08403; BF9343_2622.
GeneIDi3287197.
KEGGibfs:BF9343_2622.
PATRICi21041984. VBIBacFra29119_2719.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR626927 Genomic DNA. Translation: CAH08403.1.
RefSeqiYP_212324.1. NC_003228.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GBSX-ray2.48A/B25-223[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272559.BF2707.

Protocols and materials databases

DNASUi3287197.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAH08403; CAH08403; BF9343_2622.
GeneIDi3287197.
KEGGibfs:BF9343_2622.
PATRICi21041984. VBIBacFra29119_2719.

Phylogenomic databases

eggNOGiNOG82134.
HOGENOMiHOG000291263.
OMAiKIAIDMS.
OrthoDBiEOG6B3650.

Enzyme and pathway databases

BioCyciBFRA272559:GKF0-2658-MONOMER.

Family and domain databases

InterProiIPR025921. HmuY.
[Graphical view]
PfamiPF14064. HmuY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25285 / NCTC 9343Imported.
  2. "Crystal structure of a putative lipoprotein (BF2707) from Bacteroides fragilis NCTC 9343 at 2.75 A resolution."
    JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)
    Submitted (JUL-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.48 ANGSTROMS) OF 25-223.

Entry informationi

Entry nameiQ5LBW5_BACFN
AccessioniPrimary (citable) accession number: Q5LBW5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: February 4, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.