Putative lipoprotein - Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)

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Q5LBW5 (Q5LBW5_BACFN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 29. History...

Clusters with 100%, 90%, 50% identity |

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative lipoprotein EMBL CAH08403.1

Gene names

Ordered Locus Names:	BF2707
ORF Names:	BF9343_2622 EMBL CAH08403.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH08403.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides ›

Protein attributes

Sequence length	223 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
PTM	Lipoprotein EMBL CAH08403.1
Technical term	3D-structure PDB 4GBS Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence

Length

Mass (Da)

Tools

Q5LBW5 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: 29B807D48F33739A
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223

25,015

        10         20         30         40         50         60 
MRKAILFCLA ITLLGTMLIS FSACNGILSS LYDEPETAKD FGFITIDHAN HSGTVRVDAT 

        70         80         90        100        110        120 
QYTKWNYINL HTLQIDSAKV TAEGADDPDT WDLAIHRYDV KTNGGEVLET DYQSLSALKN 

       130        140        150        160        170        180 
AGSMPQGIFV ADEWTTNKIA VDVSHMMEDN GYLIYAPSDF NPELSKWLNV DTSEMPPIYT 

       190        200        210        220 
PSNKVYLLRM KDDTMAAIRL VSYMNAAGIK GYMTFDYIYP YEP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. Parkhill J. Science 307:1463-1465(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25285 / NCTC 9343.
[2]	"Crystal structure of a putative lipoprotein (BF2707) from Bacteroides fragilis NCTC 9343 at 2.75 A resolution." JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) Submitted (JUL-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.48 ANGSTROMS) OF 25-223.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CR626927 Genomic DNA. Translation: CAH08403.1.

RefSeq

YP_212324.1. NC_003228.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4GBS	X-ray	2.48	A/B	25-223	[»]

ModBase

Protein-protein interaction databases

STRING

Protocols and materials databases

DNASU

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

CAH08403; CAH08403; BF9343_2622.

GeneID

KEGG

PATRIC

21041984. VBIBacFra29119_2719.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

HOGENOM

OMA

ProtClustDB

Family and domain databases

InterPro

IPR025921. HmuY.
[Graphical view]

Pfam

PF14064. HmuY. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q5LBW5_BACFN

Accession

Primary (citable) accession number: Q5LBW5

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info