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Q5LBW5 (Q5LBW5_BACFN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length223 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   PTMLipoprotein EMBL CAH08403.1
   Technical term3D-structure PDB 4GBS
Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region114 – 1163Sulfate binding PDB 4GBS

Sequences

Sequence LengthMass (Da)Tools
Q5LBW5 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: 29B807D48F33739A

FASTA22325,015
        10         20         30         40         50         60 
MRKAILFCLA ITLLGTMLIS FSACNGILSS LYDEPETAKD FGFITIDHAN HSGTVRVDAT 

        70         80         90        100        110        120 
QYTKWNYINL HTLQIDSAKV TAEGADDPDT WDLAIHRYDV KTNGGEVLET DYQSLSALKN 

       130        140        150        160        170        180 
AGSMPQGIFV ADEWTTNKIA VDVSHMMEDN GYLIYAPSDF NPELSKWLNV DTSEMPPIYT 

       190        200        210        220 
PSNKVYLLRM KDDTMAAIRL VSYMNAAGIK GYMTFDYIYP YEP 

« Hide

References

« Hide 'large scale' references
[1]"Extensive DNA inversions in the B. fragilis genome control variable gene expression."
Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. expand/collapse author list , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J.
Science 307:1463-1465(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25285 / NCTC 9343.
[2]"Crystal structure of a putative lipoprotein (BF2707) from Bacteroides fragilis NCTC 9343 at 2.75 A resolution."
JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)
Submitted (JUL-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.48 ANGSTROMS) OF 25-223 IN COMPLEX WITH SULFATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR626927 Genomic DNA. Translation: CAH08403.1.
RefSeqYP_212324.1. NC_003228.3.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4GBSX-ray2.48A/B25-223[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272559.BF2707.

Protocols and materials databases

DNASU3287197.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAH08403; CAH08403; BF9343_2622.
GeneID3287197.
KEGGbfs:BF2707.
PATRIC21041984. VBIBacFra29119_2719.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG82134.
HOGENOMHOG000291263.
OMAKIAIDMS.
OrthoDBEOG6B3650.

Enzyme and pathway databases

BioCycBFRA272559:GKF0-2658-MONOMER.

Family and domain databases

InterProIPR025921. HmuY.
[Graphical view]
PfamPF14064. HmuY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5LBW5_BACFN
AccessionPrimary (citable) accession number: Q5LBW5
Entry history
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)