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Q5L6K4

- GLGB_CHLAB

UniProt

Q5L6K4 - GLGB_CHLAB

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Chlamydophila abortus (strain DSM 27085 / S26/3)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (21 Jun 2005)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei400 – 4001NucleophileUniRule annotation
    Active sitei453 – 4531Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    BioCyciCABO218497:GJB0-275-MONOMER.
    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:CAB262
    OrganismiChlamydophila abortus (strain DSM 27085 / S26/3)
    Taxonomic identifieri218497 [NCBI]
    Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydophila
    ProteomesiUP000001012: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7217211,4-alpha-glucan branching enzyme GlgBPRO_0000260643Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi218497.CAB262.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5L6K4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiKWEIVTA.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5L6K4-1 [UniParc]FASTAAdd to Basket

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    MVERIVNSED VSLLVSGRQS NPHKFLGIVS ENSSQDRIIL FRPGAHSVVV    50
    ELQGNIAHAQ HHHSGIFSLT APKGTLPQDY RIYHQNGLLA HDPYAFPPLW 100
    GEVDSFLFHQ GTHYKIYECM GAIPYNVQGI SGVLFVVWAP HAQRVSVVGD 150
    FNFWNGLVNP LRKVSDLGVW ELFIPGLEEG TLYKWEIVSA SGEVLIKTDP 200
    YGKRFDVPPH APSRVVDSDR YTWHDAAWME KRKHRGDQPL AIYEVHVGSW 250
    QWHEGKPLGY RELAKKLAAY CKEMHYTHVE LLPVTEHPLN ESWGYQVTGY 300
    YAPTCRYGTP EDFQFFVDHL HRENIGVILD WVPGHFPTDG FALAHFDGEA 350
    LYESIENHEP LHPHWRTYTF DYRCNEVVNF LLGSALFWLD KMHIDGLRVD 400
    AVTSMLYLDY GRQEGEWSPN IYGGRENLQA IEFIKHLNSV VHREFPGVLT 450
    FAEESTDFPK VTQAVAQGGL GFDYKWNLGW MHDTFRYIQV DPLFRSYHHK 500
    DLTFSLWYAF NERYLLPLSH DEVVHGKGSL LQKMPGDTWT KFAHMRLLLS 550
    YHICQPGKKL LFMGGEFAQG KEWTPDSPLD WHLLDHPDHA YLHKCVARMN 600
    ALYCDLPYFW KGDGKQGSFR WVDFKDTENH VIAYYRFSGE DRSSALLCVH 650
    HFSSGYFPSY VLYCQDIHSC QLLFNSDDCC FGGSGKGNRQ PVLCLDQHVS 700
    WGIDIELPPL ATLIFHVDFV N 721
    Length:721
    Mass (Da):83,023
    Last modified:June 21, 2005 - v1
    Checksum:i5E4CBEFF46AF64A6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR848038 Genomic DNA. Translation: CAH63718.1.
    RefSeqiYP_219688.1. NC_004552.2.

    Genome annotation databases

    EnsemblBacteriaiCAH63718; CAH63718; CAB262.
    GeneIDi3338056.
    KEGGicab:CAB262.
    PATRICi20201942. VBIChlAbo21869_0290.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR848038 Genomic DNA. Translation: CAH63718.1 .
    RefSeqi YP_219688.1. NC_004552.2.

    3D structure databases

    ProteinModelPortali Q5L6K4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 218497.CAB262.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAH63718 ; CAH63718 ; CAB262 .
    GeneIDi 3338056.
    KEGGi cab:CAB262.
    PATRICi 20201942. VBIChlAbo21869_0290.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi KWEIVTA.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci CABO218497:GJB0-275-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 27085 / S26/3.

    Entry informationi

    Entry nameiGLGB_CHLAB
    AccessioniPrimary (citable) accession number: Q5L6K4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: June 21, 2005
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3