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Q5L5H8 (Q5L5H8_CHLAB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transcription antitermination protein nusG RuleBase RU000538
Gene names
Name:nusG EMBL CAH64113.1
Ordered Locus Names:CAB666
OrganismChlamydophila abortus [Complete proteome] [HAMAP]
Taxonomic identifier83555 [NCBI]
Taxonomic lineageBacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydophila

Protein attributes

Sequence length182 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538

Sequence similarities

Belongs to the nusG family. RuleBase RU003559

Sequences

Sequence LengthMass (Da)Tools
Q5L5H8 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: 148E3E76194AEE9A

FASTA18220,878
        10         20         30         40         50         60 
MFKWYVVQVF TAQEKKVKKA LEGFKESSGM TDFIQEIVLP IENVMEVKKG EHKVVEKFIW 

        70         80         90        100        110        120 
PGYLLIKMHL TDESWLYVKN NPGVVEFLGG GVPLALSEDE VRNILKDIEE KKAGVVQKHK 

       130        140        150        160        170        180 
FDVGSRVKIN DGVFVNFIGV VSEVFHDKGR LSVMVSIFGR ETRVDDLEFW QVEEVALEQE 


SE

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References

[1]"The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation."
Thomson N.R., Yeats C., Bell K., Holden M.T.G., Bentley S.D., Livingstone M., Cerdeno-Tarraga A.-M., Harris B., Doggett J., Ormond D., Mungall K., Clarke K., Feltwell T., Hance Z., Sanders M., Quail M.A., Price C., Barrell B.G., Parkhill J., Longbottom D.
Genome Res. 15:629-640(2005) [PubMed: 15837807] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S26/3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR848038 Genomic DNA. Translation: CAH64113.1.
RefSeqYP_220064.1. NC_004552.2.

3D structure databases

ProteinModelPortalQ5L5H8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3337473.
GenomeReviewsGene locus CAB666 in contig CR848038_GR.
KEGGcab:CAB666.
PATRIC20202847. VBIChlAbo21869_0730.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG751162.
OMAVASGCEK.
PhylomeDBQ5L5H8.
ProtClustDBPRK05609.

Family and domain databases

InterProIPR005824. KOW.
IPR001062. Transcrpt_antiterm_NusG.
IPR006645. Transcrpt_antiterm_NusG_N.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KOK02601.
PfamPF02357. NusG. 1 hit.
[Graphical view]
PRINTSPR00338. NUSGTNSCPFCT.
SMARTSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMSSF82679. Transcrpt_antiterm_NusG_N. 1 hit.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00922. NusG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5L5H8_CHLAB
AccessionPrimary (citable) accession number: Q5L5H8
Entry history
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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