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Q5L562 (GLGA_CHLAB) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:CAB790
OrganismChlamydophila abortus (strain DSM 27085 / S26/3) [Complete proteome] [HAMAP]
Taxonomic identifier218497 [NCBI]
Taxonomic lineageBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydophila

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 475475Glycogen synthase HAMAP-Rule MF_00484
PRO_0000230237

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5L562 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: ABAFD4E9BF47B1BC

FASTA47553,182
        10         20         30         40         50         60 
MKIIQASVEC APFIKAGGLG DVVYSLSKAL SIHHDVEILL PFYPLLFPAF SSQVLDEHVF 

        70         80         90        100        110        120 
AYNFLGRQNA TATSYRYEGM TLTVITLDSQ LELFSTSTIY TEDDTLRFSA FSAAAAAYIQ 

       130        140        150        160        170        180 
KLDKVDVVHM HDWHVGLLAG LLKEPHLPSY PKRIFTIHNF SYRGYCSTQL LGASEISDFG 

       190        200        210        220        230        240 
LSNYQLFRDP STSVLLKGAL YCSDYITTVS PSYAQDILND YSDYEIHDAI MSRRHVFCGI 

       250        260        270        280        290        300 
LNGIDENIWN PETDPALAVR YGTHLLKSPD VLFTKKEENK IALYEKLGLS LEYSPLMCVI 

       310        320        330        340        350        360 
SRIVEQKGPE FMKAAILHAM ENSYALVIAG TCYDQETQRQ FTNLQESLTT SPNIRIILDY 

       370        380        390        400        410        420 
NDPLVRLIYG AADMICIPSH FEPCGLTQLI GMRYGTVPLV RSTGGLADTV AAGVNGFTFS 

       430        440        450        460        470 
HTDNFNDFFH MLSQAVSTYR HEPDVWFQLV EEGMLRPSGL TTMAAHYLGV YNSLL 

« Hide

References

[1]"The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation."
Thomson N.R., Yeats C., Bell K., Holden M.T.G., Bentley S.D., Livingstone M., Cerdeno-Tarraga A.-M., Harris B., Doggett J., Ormond D., Mungall K., Clarke K., Feltwell T., Hance Z., Sanders M., Quail M.A., Price C., Barrell B.G., Parkhill J., Longbottom D.
Genome Res. 15:629-640(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 27085 / S26/3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR848038 Genomic DNA. Translation: CAH64232.1.
RefSeqYP_220180.1. NC_004552.2.

3D structure databases

ProteinModelPortalQ5L562.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING218497.CAB790.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAH64232; CAH64232; CAB790.
GeneID3337318.
KEGGcab:CAB790.
PATRIC20203115. VBIChlAbo21869_0857.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMACRLTEQK.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycCABO218497:GJB0-809-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CHLAB
AccessionPrimary (citable) accession number: Q5L562
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: June 21, 2005
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways