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Q5L3W1 (Q5L3W1_GEOKA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Deoxyribonuclease EMBL BAD74317.1
Gene names
Ordered Locus Names:GK0032
OrganismGeobacillus kaustophilus (strain HTA426) [Complete proteome] [HAMAP]
Taxonomic identifier235909 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionendodeoxyribonuclease activity, producing 5'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5L3W1 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 001ACE25AAE8A078

FASTA25628,929
        10         20         30         40         50         60 
MLFDTHAHLN AVQYEEDLEQ VIERARDEGV SHIVVVGFDR PTIDRAIELA ERYPFIYAAV 

        70         80         90        100        110        120 
GWHPVDAIEM TDDDLQMIEQ LAAHPKVVAL GEMGLDYHWD KSPKDVQQEV FRQQIRLAKK 

       130        140        150        160        170        180 
VKLPIIIHNR EATADILKIL QEENAAEIGG IMHCFSGSVE VAKQCMDMNF LISLGGPVTF 

       190        200        210        220        230        240 
KNAKKPKEVA KEIPLSHLLI ETDCPYLTPH PFRGKRNEPS YVKYVAEAIA QIKNISFAEV 

       250 
AETTAENAKK LFAIDR

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References

[1]"Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus."
Takami H., Takaki Y., Chee G.-J., Nishi S., Shimamura S., Suzuki H., Matsui S., Uchiyama I.
Nucleic Acids Res. 32:6292-6303(2004) [PubMed: 15576355] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HTA426.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000043 Genomic DNA. Translation: BAD74317.1.
RefSeqYP_145885.1. NC_006510.1.

3D structure databases

ProteinModelPortalQ5L3W1.
SMRQ5L3W1. Positions 2-252.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3185901.
GenomeReviewsGene locus GK0032 in contig BA000043_GR.
KEGGgka:GK0032.
NMPDRfig|235909.3.peg.68.
PATRIC21961081. VBIGeoKau81518_0078.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG629833.
OMALPLVIHT.
ProtClustDBCLSK872601.

Family and domain databases

InterProIPR012278. DNase_TatD.
IPR018228. DNase_TatD-rel_CS.
IPR015991. DNase_TatD_bac-type.
IPR001130. TatD_superfamily.
[Graphical view]
KOK03424.
PANTHERPTHR10060. TatD_DNase. 1 hit.
PfamPF01026. TatD_DNase. 1 hit.
[Graphical view]
PIRSFPIRSF005902. DNase_TatD. 1 hit.
TIGRFAMsTIGR00010. TIGR00010. 1 hit.
PROSITEPS01137. TATD_1. 1 hit.
PS01091. TATD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5L3W1_GEOKA
AccessionPrimary (citable) accession number: Q5L3W1
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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