Q5L242 (Q5L242_GEOKA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-cyclodextrinase EMBL BAD74988.1

Gene names

Ordered Locus Names:

GK0703

Organism

Geobacillus kaustophilus (strain HTA426) [Complete proteome] [HAMAP]

Taxonomic identifier

235909 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length	588 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5L242 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 417A644585C02E36	FASTA	588	68,166
	10 20 30 40 50 60 MRKEAIHHRS TDHFAYAYDS ETLHLRLQTK KHDVDHVELL FGDPYEWHDG AWQFQTMPMR 70 80 90 100 110 120 KTGSDGLFDY WLAEVKPPYR RLRYGFVLRA GGEKLVYTEK GFYHEAPSDD TAYYFCFPFL 130 140 150 160 170 180 HRVDLFQAPG WVKDTVWYQI FPERFANGNP AISPKGARPW GSEDPTPTSF FGGDLQGIID 190 200 210 220 230 240 HLDYLADLGI TGIYLTPIFR APSNHKYDTA DYFEIDPHFG DKETLKTLVK RCHEKGIRVM 250 260 270 280 290 300 LDAVFNHCGY EFGPFQDVLK NGAASRYKDW FHIREFPLQT EPRPNYDTFA FVPQMPKLNT 310 320 330 340 350 360 AHPEVKRYLL DVATYWIREF DIDGWRLDVA NEIDHQFWRE FRQAVKALKP DVYILGEIWH 370 380 390 400 410 420 DAMPWLRGDQ FDAVMNYPLA DAALRFFAKE EISARQFADI MIRLLHSYPK QVNEAAFNLL 430 440 450 460 470 480 GSHDTPRLLT VCGGDVRKVK LLFLFQLTFT GSPCIYYGDE IGMTGGNDPE CRKCMVWDPE 490 500 510 520 530 540 HQNRELLAHV KRLIALRKQH RALRRGDVSF LSADDNPNHL VYEKIDGAET VLVIINRSND 550 560 570 580 AADIPLPLDL RGKWLVDLLT GERFAAEAET LCASLPPYGF VLYKVESW

References

[1]

"Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus." Takami H., Takaki Y., Chee G.-J., Nishi S., Shimamura S., Suzuki H., Matsui S., Uchiyama I. Nucleic Acids Res. 32:6292-6303(2004) [PubMed: 15576355] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HTA426.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000043 Genomic DNA. Translation: BAD74988.1.
RefSeq	YP_146556.1. NC_006510.1.
3D structure databases
ProteinModelPortal	Q5L242.
SMR	Q5L242. Positions 1-588.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3183543.
GenomeReviews	Gene locus GK0703 in contig BA000043_GR.
KEGG	gka:GK0703.
NMPDR	fig|235909.3.peg.1277.
PATRIC	21962623. VBIGeoKau81518_0783.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	ETVWYQI.
ProtClustDB	CLSK873463.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5L242_GEOKA

Accession

Primary (citable) accession number: Q5L242

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)