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Protein

tRNA pseudouridine synthase B

Gene

truB

Organism
Geobacillus kaustophilus (strain HTA426)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei38NucleophileUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processtRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
Alternative name(s):
tRNA pseudouridine(55) synthaseUniRule annotation
Short name:
Psi55 synthaseUniRule annotation
tRNA pseudouridylate synthaseUniRule annotation
tRNA-uridine isomeraseUniRule annotation
Gene namesi
Name:truBUniRule annotation
Ordered Locus Names:GK1266
OrganismiGeobacillus kaustophilus (strain HTA426)
Taxonomic identifieri235909 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillusGeobacillus thermoleovorans group
Proteomesi
  • UP000001172 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001218381 – 285tRNA pseudouridine synthase BAdd BLAST285

Interactioni

Protein-protein interaction databases

STRINGi235909.GK1266

Structurei

3D structure databases

ProteinModelPortaliQ5L0I5
SMRiQ5L0I5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D0T Bacteria
COG0130 LUCA
HOGENOMiHOG000231225
KOiK03177
OMAiVDCSKGT
OrthoDBiPOG091H02G9

Family and domain databases

HAMAPiMF_01080 TruB_bact, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR002501 PsdUridine_synth_N
IPR014780 tRNA_psdUridine_synth_TruB
IPR032819 TruB_C
PANTHERiPTHR13767 PTHR13767, 1 hit
PfamiView protein in Pfam
PF16198 TruB_C_2, 1 hit
PF01509 TruB_N, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00431 TruB, 1 hit

Sequencei

Sequence statusi: Complete.

Q5L0I5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGVLLLNKP KGMTSHDCVA KVRRLLGVKK AGHTGTLDPN VSGVLPICLG
60 70 80 90 100
KATRIAEFLT GTTKTYEGKV TLGAATTTED ADGDIIAARP VDRPIARAEI
110 120 130 140 150
EAVFDSLTGE IEQTPPMYSA VKVGGKKLYE YARAGIEVER PTRRVTIYEL
160 170 180 190 200
ELLDEREQFF GETVSFRFRV TCSKGTYVRT LAVMIGERLG YPAHMSDLIR
210 220 230 240 250
TASGPFRLED CVTFEDVERR AADGTADALL IPIERALFHL PKYEINDKVA
260 270 280
EKVKNGALLR LPAFLEKLTG RSCLFRPSGK RWPCT
Length:285
Mass (Da):31,436
Last modified:February 1, 2005 - v1
Checksum:i68EC08DAD8B5EC5F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000043 Genomic DNA Translation: BAD75551.1

Genome annotation databases

EnsemblBacteriaiBAD75551; BAD75551; GK1266
KEGGigka:GK1266
PATRICifig|235909.7.peg.1367

Similar proteinsi

Entry informationi

Entry nameiTRUB_GEOKA
AccessioniPrimary (citable) accession number: Q5L0I5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: February 1, 2005
Last modified: March 28, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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