Reviewed, UniProtKB/Swiss-Prot Q5KYP6 (ARAB_GEOKA)

Names and origin

Protein names

Recommended name:
    Ribulokinase
    EC=2.7.1.16

Gene names

Name:	araB
Ordered Locus Names:	GK1905

Organism

Geobacillus kaustophilus [Complete proteome] [HAMAP]

Taxonomic identifier

1462 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length	564 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family.

Ontologies

Keywords
Biological process	Arabinose catabolism Carbohydrate metabolism
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 564	564	Ribulokinase HAMAP MF_00520		PRO_0000263402

Sequences

	Sequence		Length	Mass (Da)
	Q5KYP6-1 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 37109C1971502AC4	FASTA	564	62,026
	10 20 30 40 50 60 MGKKYVIGID YGTESGRAVL VDLEGNEIAD HVTPYPHGVI DEVLPESNVQ LEPDWALQHP 70 80 90 100 110 120 ADYIEVLATA VPTVLQKSGV NPADVIGVGI DFTSCTMLPV DASGEPLCLK PEFRNRPHSW 130 140 150 160 170 180 VKLWKHHAAQ DEANLLNEIA AKRGEAFLPR YGGKISSEWM IAKIWQILNE DPEIYEQTDL 190 200 210 220 230 240 FLEATDWVIF KMTGNIVRNS CAAGYKSIWH KQDGYPSKEF FRALDPRLEH LTETKLRGPI 250 260 270 280 290 300 VPLGTRAGVL TNEMAAMMGL LPGTAVAVGN VDAHAAVPGV GVVEPGKLVM AMGTSICHML 310 320 330 340 350 360 LGTEEKYVEG MCGVVEDGII PGYFGYEAGQ SAVGDIFAWY VEQGVPAYVK EAAEKEGVSV 370 380 390 400 410 420 HEWLEKRAAA YRPGETGLLA LDWWNGNRSV LVDTDLTGLI VGYTLLTKPE EIYRALLEAT 430 440 450 460 470 480 AFGTRKIIDA FVENGVKVDE LYACGGLPQK NKLLMQIYAD VTNREIKIAA SKQTPAVGAA 490 500 510 520 530 540 MFAAVAAGKE NGGYESIVEA ARNMGKVREE TFKPIPENVA MYEQLYQEYT KLHDYFGRGE 550 560 NDVMKRLKHW KETARAAKES MTLS

References

[1]

"Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus." Takami H., Takaki Y., Chee G.-J., Nishi S., Shimamura S., Suzuki H., Matsui S., Uchiyama I. Nucleic Acids Res. 32:6292-6303(2004) [PubMed: 15576355] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HTA426.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000043 Genomic DNA. Translation: BAD76190.1.
RefSeq	YP_147758.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3185294.
GenomeReviews	Gene locus GK1905 in contig BA000043_GR.
KEGG	gka:GK1905.
NMPDR	fig|235909.3.peg.754.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG312681.
OMA	EATAYGT.
Enzyme and pathway databases
BioCyc	GKAU235909:GK1905-MONOMER.
BRENDA	2.7.1.16. 281547.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ARAB_GEOKA

Accession

Primary (citable) accession number: Q5KYP6

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	February 1, 2005
Last modified:	February 9, 2010
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)