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Protein
Submitted name:

Hypothetical conserved protein

Gene

GK3002

Organism
Geobacillus kaustophilus (strain HTA426)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi58MagnesiumCombined sources1
Metal bindingi60MagnesiumCombined sources1
Metal bindingi88MagnesiumCombined sources1

GO - Molecular functioni

Keywordsi

LigandMagnesiumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciGKAU235909:GJO7-3114-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Hypothetical conserved proteinImported
Gene namesi
Ordered Locus Names:GK3002Imported
OrganismiGeobacillus kaustophilus (strain HTA426)Imported
Taxonomic identifieri235909 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillusGeobacillus thermoleovorans group
Proteomesi
  • UP000001172 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi235909.GK3002.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FCJX-ray1.30A/B/C1-119[»]
2I5RX-ray1.65A/B/C1-119[»]
ProteinModelPortaliQ5KVJ9.
SMRiQ5KVJ9.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5KVJ9.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 93ToprimInterPro annotationAdd BLAST89

Phylogenomic databases

eggNOGiENOG410619X. Bacteria.
COG1658. LUCA.
HOGENOMiHOG000098737.
OMAiMMAIVNK.
OrthoDBiPOG091H0WDP.

Family and domain databases

CDDicd01027. TOPRIM_RNase_M5_like. 1 hit.
InterProiView protein in InterPro
IPR006171. TOPRIM_domain.
IPR034141. TOPRIM_RNase_M5-like.
PfamiView protein in Pfam
PF01751. Toprim. 1 hit.
SMARTiView protein in SMART
SM00493. TOPRIM. 1 hit.
PROSITEiView protein in PROSITE
PS50880. TOPRIM. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5KVJ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRVEKVIIV EGRSDKQKVA AVLNEPVVIV CTNGTISDAR LEELADELEG
60 70 80 90 100
CDVYVLADAD EAGEKLRRQF RRMFPEAEHL YIDRAYREVA AAPPWHLAQV
110
LLRARFDVRI ESLMRGRGE
Length:119
Mass (Da):13,608
Last modified:February 1, 2005 - v1
Checksum:i6B53C8DF513EEC7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000043 Genomic DNA. Translation: BAD77287.1.
RefSeqiWP_011232472.1. NC_006510.1.

Genome annotation databases

EnsemblBacteriaiBAD77287; BAD77287; GK3002.
GeneIDi3186905.
KEGGigka:GK3002.
PATRICi21967549. VBIGeoKau81518_3206.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000043 Genomic DNA. Translation: BAD77287.1.
RefSeqiWP_011232472.1. NC_006510.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FCJX-ray1.30A/B/C1-119[»]
2I5RX-ray1.65A/B/C1-119[»]
ProteinModelPortaliQ5KVJ9.
SMRiQ5KVJ9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi235909.GK3002.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD77287; BAD77287; GK3002.
GeneIDi3186905.
KEGGigka:GK3002.
PATRICi21967549. VBIGeoKau81518_3206.

Phylogenomic databases

eggNOGiENOG410619X. Bacteria.
COG1658. LUCA.
HOGENOMiHOG000098737.
OMAiMMAIVNK.
OrthoDBiPOG091H0WDP.

Enzyme and pathway databases

BioCyciGKAU235909:GJO7-3114-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5KVJ9.

Family and domain databases

CDDicd01027. TOPRIM_RNase_M5_like. 1 hit.
InterProiView protein in InterPro
IPR006171. TOPRIM_domain.
IPR034141. TOPRIM_RNase_M5-like.
PfamiView protein in Pfam
PF01751. Toprim. 1 hit.
SMARTiView protein in SMART
SM00493. TOPRIM. 1 hit.
PROSITEiView protein in PROSITE
PS50880. TOPRIM. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ5KVJ9_GEOKA
AccessioniPrimary (citable) accession number: Q5KVJ9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 10, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.