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Protein
Submitted name:

Hypothetical conserved protein

Gene

GK3002

Organism
Geobacillus kaustophilus (strain HTA426)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi58 – 581MagnesiumCombined sources
Metal bindingi60 – 601MagnesiumCombined sources
Metal bindingi88 – 881MagnesiumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciGKAU235909:GJO7-3114-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Hypothetical conserved proteinImported
Gene namesi
Ordered Locus Names:GK3002Imported
OrganismiGeobacillus kaustophilus (strain HTA426)Imported
Taxonomic identifieri235909 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
Proteomesi
  • UP000001172 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi235909.GK3002.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FCJX-ray1.30A/B/C1-119[»]
2I5RX-ray1.65A/B/C1-119[»]
ProteinModelPortaliQ5KVJ9.
SMRiQ5KVJ9. Positions 2-119.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5KVJ9.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 9389ToprimInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410619X. Bacteria.
COG1658. LUCA.
HOGENOMiHOG000098737.
OMAiMMAIVNK.
OrthoDBiEOG6V1M62.

Family and domain databases

InterProiIPR006171. Toprim_domain.
[Graphical view]
PfamiPF01751. Toprim. 1 hit.
[Graphical view]
SMARTiSM00493. TOPRIM. 1 hit.
[Graphical view]
PROSITEiPS50880. TOPRIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5KVJ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRVEKVIIV EGRSDKQKVA AVLNEPVVIV CTNGTISDAR LEELADELEG
60 70 80 90 100
CDVYVLADAD EAGEKLRRQF RRMFPEAEHL YIDRAYREVA AAPPWHLAQV
110
LLRARFDVRI ESLMRGRGE
Length:119
Mass (Da):13,608
Last modified:February 1, 2005 - v1
Checksum:i6B53C8DF513EEC7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000043 Genomic DNA. Translation: BAD77287.1.
RefSeqiWP_011232472.1. NC_006510.1.

Genome annotation databases

EnsemblBacteriaiBAD77287; BAD77287; GK3002.
GeneIDi3186905.
KEGGigka:GK3002.
PATRICi21967549. VBIGeoKau81518_3206.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000043 Genomic DNA. Translation: BAD77287.1.
RefSeqiWP_011232472.1. NC_006510.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2FCJX-ray1.30A/B/C1-119[»]
2I5RX-ray1.65A/B/C1-119[»]
ProteinModelPortaliQ5KVJ9.
SMRiQ5KVJ9. Positions 2-119.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi235909.GK3002.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD77287; BAD77287; GK3002.
GeneIDi3186905.
KEGGigka:GK3002.
PATRICi21967549. VBIGeoKau81518_3206.

Phylogenomic databases

eggNOGiENOG410619X. Bacteria.
COG1658. LUCA.
HOGENOMiHOG000098737.
OMAiMMAIVNK.
OrthoDBiEOG6V1M62.

Enzyme and pathway databases

BioCyciGKAU235909:GJO7-3114-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5KVJ9.

Family and domain databases

InterProiIPR006171. Toprim_domain.
[Graphical view]
PfamiPF01751. Toprim. 1 hit.
[Graphical view]
SMARTiSM00493. TOPRIM. 1 hit.
[Graphical view]
PROSITEiPS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus."
    Takami H., Takaki Y., Chee G.-J., Nishi S., Shimamura S., Suzuki H., Matsui S., Uchiyama I.
    Nucleic Acids Res. 32:6292-6303(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HTA426Imported.
  2. "Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus."
    Rezacova P., Borek D., Moy S.F., Joachimiak A., Otwinowski Z.
    Proteins 70:311-319(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.30 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.

Entry informationi

Entry nameiQ5KVJ9_GEOKA
AccessioniPrimary (citable) accession number: Q5KVJ9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: March 16, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.