Q5KTI5 (Q5KTI5_9ALTE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agarase EMBL BAD86832.1

Submitted name:
Beta-agarase EMBL BAK08903.1

Gene names

Name:

agaO EMBL BAD86832.1

Organism

Microbulbifer thermotolerans EMBL BAD86832.1

Taxonomic identifier

252514 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Microbulbifer

Protein attributes

Sequence length	1175 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5KTI5 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 5533FD921B880B70	FASTA	1,175	129,802
	10 20 30 40 50 60 MRLSKSQGIL PLAHAVLAAA IAYSTAATAA DYRLEAEDFT NVGGTYNDGQ PQKISVYTVN 70 80 90 100 110 120 GITAINYVNK GDYAEYTLSV PQAGQYDLTY FAGTAIDGAR IDFQVNNNGS WQTLARTDVP 130 140 150 160 170 180 NAGWDNFQPL PAGSIHLSSG SQQIRLFGGG DHDWQWNLDK MELAYIDDSS SSSGGGSTSS 190 200 210 220 230 240 SSSGGSSSSS GSGSSSSGGS PEEGGHVSGT FKLEAESAHH VGGEIDTYAI NGGVAVNYFN 250 260 270 280 290 300 SGDYLEYNLH LDQSGLYRPK YYVSTAHSSG VAVGLMATDH EGALVTKNTS EVQSQGGWDS 310 320 330 340 350 360 FYLLNAASDI NLFSGDLTIR IYGAGTQDFQ FNIDYVIFER ISDVDLDLDG DSDGIADVND 370 380 390 400 410 420 SCPGTDPSET ANSEGCAPSQ LDTDKDGIAD NRDQCPTTAP GDFVDSEGCA STGADDDDLD 430 440 450 460 470 480 GIANQEDQCP DTPFGENVAP SGCTGFEDSD SDGIANGTDQ CPSTPAKEFT NESGCSPSQV 490 500 510 520 530 540 ANPHSVKVTV NANIKHSVKG ISDFGRNRHI TAHTTIYEKD WEGHADKLNY LVNTLDVTLG 550 560 570 580 590 600 RDNGTATWKF QDTKEDPNRE NWPDLDYMVT RGKELRENYE ANPFYKRFSA DRTELIAGTN 610 620 630 640 650 660 PHPTYPTLSW NANGSTWHDW QPMHIETSAA WMGQYLKHYY ANSSNGYIGD PMPKFWEVIN 670 680 690 700 710 720 EPDMEMKTGK FMVTNQEAIW EYHNLVAQEI RSKLGNEAPL IGGMTWGQHD FYRRDGISRY 730 740 750 760 770 780 ADNAYDQWIV ADDPAEEAAA EEFFRQAMAT TVDDTRDQNW YQWDVMWKGF MDAAGHNMDF 790 800 810 820 830 840 YSVHVYDWPG VNSDAKSTLR RNGHLPAMLD MIEWYDVYQN GQANRKPIVI SEYGAVQGGW 850 860 870 880 890 900 NTLAHQPRFE SEVLKSFNAM LMQILERPDY VIKSMPFTPA KPLWGYYPGG CGYEEVRNCT 910 920 930 940 950 960 APYHYSLLIE PVLNSDNWQW SDYIKFYELW ADIDGTRVDS VSSDPDVQVQ SYVNNNELFI 970 980 990 1000 1010 1020 IINNLETVDT TIDLTVAGLN NAQLQNVELR NMHFDNNFDT QLERHHMKQM PTKVTLAADA 1030 1040 1050 1060 1070 1080 TLVLRYTLNS TIAINQSVDE KKYFGNSVSG GSVPHRISVA GGAKNLQVNN VSVPSGYAES 1090 1100 1110 1120 1130 1140 QLRLTVALYP SQDDTPDSLL QIDTLTINGH TIETPIDWRG RKENSVERYF NTLEIPVPVD 1150 1160 1170 VLQKNNTISV DFRHNGELTV ANLVIKEYTT TPVRH

References

[1]	"Cloning, expression, and characterization of a glycoside hydrolase family 86 beta-agarase from a deep-sea Microbulbifer-like isolate." Ohta Y., Hatada Y., Nogi Y., Li Z., Ito S., Horikoshi K. Appl. Microbiol. Biotechnol. 66:266-275(2004) [PubMed: 15490156] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: JAMB-A94 EMBL BAD86832.1.
[2]	"Hyper-production and Characterization of the iota-Carrageenase Useful for iota-Carrageenan Oligosaccharide Production from a Deep-sea Bacterium, Microbulbifer thermotolerans JAMB-A94T, and Insight into the Unusual Catalytic Mechanism." Hatada Y., Mizuno M., Li Z., Ohta Y. Mar. Biotechnol. 0:0-0(2011) Cited for: NUCLEOTIDE SEQUENCE. Strain: JAMB-A94 EMBL BAK08903.1.
[3]	"Enzymatic properties and nucleotide and amino acid sequences of a thermostable beta-agarase from the novel marine isolate, JAMB-A94." Ohta Y., Nogi Y., Miyazaki M., Li Z., Hatada Y., Ito S., Horikoshi K. Biosci. Biotechnol. Biochem. 68:1073-1081(2004) [PubMed: 15170112] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: JAMB-A94 EMBL BAK08903.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB160954 Genomic DNA. Translation: BAD86832.1. AB516430 Genomic DNA. Translation: BAK08903.1.
3D structure databases
ProteinModelPortal	Q5KTI5.
SMR	Q5KTI5. Positions 30-164.
ModBase	Search...
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6. GH86. Glycoside Hydrolase Family 86.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Pfam	PF03422. CBM_6. 2 hits. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51175. CBM6. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5KTI5_9ALTE

Accession

Primary (citable) accession number: Q5KTI5

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	September 21, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)