Q5KI59 (Q5KI59_CRYNJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pol II transcription elongation factor, putative EMBL AAW43277.1

Gene names

Ordered Locus Names:

CND04120

Organism

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans)

Taxonomic identifier

214684 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Tremellomycetes › Tremellales › Tremellaceae › Filobasidiella › Filobasidiella/Cryptococcus neoformans species complex

Protein attributes

Sequence length	902 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Elongation factor EMBL AAW43277.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5KI59 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: ED2F6A9F905F765A	FASTA	902	101,258
	10 20 30 40 50 60 MPARRLRPVI ELAPLPPAVR ALYARPPSAA PAHTQHRTFC EKCRRPPAAL ILESLHSRPK 70 80 90 100 110 120 KRPRTKRPSP EDDDLLSDSE LVHILQGWVT CRRCVVASHY GCLSASQKKA VLESLRSQDL 130 140 150 160 170 180 AALGNIDPTT QASDVPLRKT VPIQQEADFL CAKCGEGVPC FVCCKDELLN VDPVTVGRRK 190 200 210 220 230 240 DDDAGVVDVG KEDSMTDMDS SKAPQLPPLA EAVSDKEIGS PQPKSTRPLF RCLRCRQAAH 250 260 270 280 290 300 YEHLKVPEPL GENPDLAEIA HHYQTQTDDG DAWTCHQCRA SPWGIDIVIA WRPLPATSPF 310 320 330 340 350 360 HSLPPPPPKT PLYKTVLPRE YLIKYSSRSF RHVEWVPHAW LSGIAPMKLR RFLEKGPLLD 370 380 390 400 410 420 LVTDETLEAR GDEVVRPSIA DIDNRAHGKD VHHEKGVGLI VDAEEDAESG LPILWSTIDR 430 440 450 460 470 480 VLDVLLIRPT AAQIKGKSKK SQSGNDRRNQ RRIVSLSPSP YDGAAPFPPD SSPNAQAVAV 490 500 510 520 530 540 KTPFEQLQAD LNIPDGLPLP DDELIEIEEW EILTGRRLLE TDVEEVAGLV GWGLFKWQDL 550 560 570 580 590 600 QYDQAHPRTE KACWDTPPPS SSPLYTAYKH GLSKYLAARH ITIPVLTPAQ IRARDNDPAR 610 620 630 640 650 660 GFVPPQEQPD CIAGGNLMPF QMEGFQWLLY KYFKRESCIL ADDMGLGKTV QIASVLGYLG 670 680 690 700 710 720 SAEHEIYPCL VVVPNSTITN WVREFEKWSP HLRVVPFYGE AASREIISKY ELFHKGTQGK 730 740 750 760 770 780 PVGLKAHIVL TTYDMITSSE FRVFSAIPRW EVLCVDEGQR LKSDNSKIFN NLKTLNSVHR 790 800 810 820 830 840 ILLTGTPLNN NIRELFNLLN FLDQDNFKDL ESMEQEYSDL NEVKVQKLHQ MIKPYILRRI 850 860 870 880 890 900 KADVLNLPPK VEIIVPISLA PLQKQMYKGI FENHAGIIED ILKARQKRRQ AIKSVQSAVP TN

References

[1]

"The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans." Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S. , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W. Science 307:1321-1324(2005) [PubMed: 15653466] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JEC21 / ATCC MYA-565.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017344 Genomic DNA. Translation: AAW43277.1.
RefSeq	XP_570584.1. XM_570584.1.
UniGene	Fne.599.
3D structure databases
ProteinModelPortal	Q5KI59.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3257040.
GenomeReviews	Gene locus CND04120 in contig AE017344_GR.
KEGG	cne:CND04120.
Phylogenomic databases
HOGENOM	HBG067727.
OrthoDB	EOG4GQTD1.
Family and domain databases
InterPro	IPR000953. Chromo_domain/shadow. IPR016197. Chromodomain-like. IPR014001. DEAD-like_helicase. IPR000330. SNF2_N. [Graphical view]
Pfam	PF00176. SNF2_N. 1 hit. [Graphical view]
SMART	SM00298. CHROMO. 1 hit. SM00487. DEXDc. 1 hit. [Graphical view]
SUPFAM	SSF54160. Chromodomain-like. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5KI59_CRYNJ

Accession

Primary (citable) accession number: Q5KI59

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 16, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)