Q5KHC5 (Q5KHC5_CRYNJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA repair protein rad16, putative EMBL AAW43451.1

Gene names

Ordered Locus Names:

CNE00510

Organism

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans)

Taxonomic identifier

214684 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Tremellomycetes › Tremellales › Tremellaceae › Filobasidiella › Filobasidiella/Cryptococcus neoformans species complex

Protein attributes

Sequence length	975 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5KHC5 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: F770C292084C11D7	FASTA	975	109,047
	10 20 30 40 50 60 MPALRSTRKS AQNQPEMAVI DSVGHSRTNN AVSIKAQRQS TVEVSIPTRR TRSSTSNTAS 70 80 90 100 110 120 LVPNGVDRDE TEDEDWADGD VNMENGDSDI ELIEDQKPQI NGVNGKGKGR AKEQAQPFNI 130 140 150 160 170 180 GKYSRVAKAS VTDLKEDTRT SGRSSRAPRR SKSQASVKIE ELDGDSTESE FVVDGGGYAM 190 200 210 220 230 240 DSEDEARQLK QAIRASSSKA ASSKGKRTNH VALNAALARI AGKRSGQSST ATDTANATPL 250 260 270 280 290 300 SDDDPVPSDS EFEEAEEQGS DLSDLSTSDS EVEVPLSRGK GSMRGGRGGA QGSKAARPSV 310 320 330 340 350 360 AKGKTAAKGK TKKFQGKGRK LGGSDSEKEE EFDGAEALSD EDESLSELSD PNMSWLEKRQ 370 380 390 400 410 420 MQKRKEKRHA AREAAPRKKK ERELAKKLGR KLTNGEKNLI ALCMHRPELE NVWGDLQANI 430 440 450 460 470 480 EPVKPITMEA HPSLKLTLLP FQKESLYWMK KQEEGPWKGG MLADEMGMGK TIQTIALLLS 490 500 510 520 530 540 EPRRKPSLVV APVVALMQWK NEIETHAEGF TVCLWHGQGR MKAAELKKFD VVLVSYGTLE 550 560 570 580 590 600 ASFRRQQRGF KRGDKFIKEK SPMHEFEWHR VVLDEAHNIK ERSTNAAKAA FALKATYKWC 610 620 630 640 650 660 LSGTPLQNRV GELYSLVRFL GADPFSHYFC KKCPCKRLHW QFSDKRHCDE CGHKPMDHVC 670 680 690 700 710 720 FWNTEILTPI AKYGVEEGGP GHTAFKKLKV LLDRMMLRRT KLERADDLGL PPRTIVVRRD 730 740 750 760 770 780 YFSPQEKELY MSLFTNAKRQ FATYVGQGTV LNNYSNIFSL ITRMRQMACH PDLVLRSKNS 790 800 810 820 830 840 TLTDVQEGTV CRLCNDTAED AIMSQCKHVF DRECIKQYLE VKQMRGHKPE CPVCHIEISI 850 860 870 880 890 900 DLEAEALDLE ENNKKARQGI LSRLNLDNWR SSSKLEALVE ELEKLRHKDC TIKSLVFSQF 910 920 930 940 950 960 VSFLDLIAFR LQRAGFNICR LEGSMTPQQR DATIQHFMKN TGVTVFLISL KAGGVALNLT 970 EASMVFMMDS SQARD

References

[1]

"The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans." Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S. , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W. Science 307:1321-1324(2005) [PubMed: 15653466] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JEC21 / ATCC MYA-565.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017345 Genomic DNA. Translation: AAW43451.1.
RefSeq	XP_570758.1. XM_570758.1.
UniGene	Fne.5124.
3D structure databases
ProteinModelPortal	Q5KHC5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3257704.
KEGG	cne:CNE00510.
Phylogenomic databases
OrthoDB	EOG4Q5CXS.
Family and domain databases
InterPro	IPR014001. DEAD-like_helicase. IPR002464. DNA/RNA_helicase_DEAH_CS. IPR001650. Helicase_C. IPR000330. SNF2_N. IPR018957. Znf_C3HC4_RING-type. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. [Graphical view]
Gene3D	G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
KO	K15083.
Pfam	PF00271. Helicase_C. 1 hit. PF00176. SNF2_N. 1 hit. PF00097. zf-C3HC4. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00184. RING. 1 hit. [Graphical view]
PROSITE	PS00690. DEAH_ATP_HELICASE. 1 hit. PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5KHC5_CRYNJ

Accession

Primary (citable) accession number: Q5KHC5

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 16, 2011
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)