Q5KCR8 (Q5KCR8_CRYNJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcription activator snf2l1, putative EMBL AAW45068.1

Gene names

Ordered Locus Names:

CNH02010

Organism

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans)

Taxonomic identifier

214684 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Tremellomycetes › Tremellales › Tremellaceae › Filobasidiella › Filobasidiella/Cryptococcus neoformans species complex

Protein attributes

Sequence length	1096 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	ATP-dependent chromatin remodeling Inferred from electronic annotation. Source: InterPro
Cellular component	chromatin remodeling complex Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro helicase activity Inferred from electronic annotation. Source: InterPro nucleosome binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5KCR8 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: EA333944CCC78F07	FASTA	1,096	126,521
	10 20 30 40 50 60 MNPLLAASSA ANPNNTSVDD DKLSDYVPNS RDLSVSRAPS VIASEDAGHL DTAPQTPEPE 70 80 90 100 110 120 EDEEDEIPED ELNEEELMDG KKITPSAAKR AAQASAKKAQ TAERKAQHAE IGKKRSAIEQ 130 140 150 160 170 180 ARFADSMKRF NYLLGQTELF QHFIDLKRQR EPQFAQMLDE QIAKQAGKGK KKAIDNRHRK 190 200 210 220 230 240 SEKEEDEELL KDEEEDEPFV FEESPAYVKG GKMRDYQVQG LNWMVSLHHN GINGILADEM 250 260 270 280 290 300 GLGKTLQTVA FIGYLKFHLG IPGPHLIIVP KSTLDNWARE VAKWVPGFDV VVLQGTKEER 310 320 330 340 350 360 GELISRRILT QDFDVLITSY EMCLREKSTL KRFSWEYIII DEAHRIKNVD SLLSQIIRTF 370 380 390 400 410 420 VSRGRLLITG TPLQNNLQEL WALLNFILPD VFSSSEDFDA WFKTKDEADP DAVVKQLHKV 430 440 450 460 470 480 LRPFLLRRVK ADVEHSLLPK KEINLYVGMT EMQRKWYKSL LEKDIDAVNG MTGKKEGKTR 490 500 510 520 530 540 LLNIVMQLRK CCNHPYLFDG AEPGPPFTTD QHLVDNAGKM VILDKLLKSM KAKGSRVLIF 550 560 570 580 590 600 SQMSRMLDIL EDYCQFRGHQ YCRIDGSTAH EDRIAAIDEY NAPESEKFVF LLTTRAGGLG 610 620 630 640 650 660 INLVTADIVV LFDSDWNPQA DLQAMDRAHR IGQTKQVYVF RFITQDAVEE RILERATQKL 670 680 690 700 710 720 KLDQLVIQEG RAQQTAKVAQ NKDDLLDMIQ HGAEKIINNK ESMLIDDDID EIIRRGEERT 730 740 750 760 770 780 KEINSKYAGL DLDALNNFKS ESLVNTWEGE DYGNRQQKRP LLWIEPSKRE RKTNYSVDQY 790 800 810 820 830 840 YRDSLKTGGP KADKPKVARA PKQVVVNDFQ FYPPRLAELQ NKETDWHRKS INYQVPVREP 850 860 870 880 890 900 EEGETQEQVE AEQKEEQERI DNAVPLSEEE VAEKETLVGE GFHDWQRRHF QSFIRALEKY 910 920 930 940 950 960 GRDDLEKVVT DVADRTEDEV REYAAVFFER YKELKDWERI MDRIRAGEEK IKEQQDRIDV 970 980 990 1000 1010 1020 LHRKIKATRF PLQELKIVYG QNKGKAYSDE EDRFLLVRMH HHGIDRDDCY ELIKRDIGEW 1030 1040 1050 1060 1070 1080 PLFRFDWFFK SRTPDELRRR AQTLLLCIMK EDDKVEDEKK PIKGKKRPID ELKSGPGSRD 1090 TTPSAAGSKG SKKKKV

References

[1]

"The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans." Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S. , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W. Science 307:1321-1324(2005) [PubMed: 15653466] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JEC21 / ATCC MYA-565.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017348 Genomic DNA. Translation: AAW45068.1.
RefSeq	XP_572375.1. XM_572375.1.
UniGene	Fne.1154.
3D structure databases
ProteinModelPortal	Q5KCR8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3259282.
GenomeReviews	Gene locus CNH02010 in contig AE017348_GR.
KEGG	cne:CNH02010.
Phylogenomic databases
HOGENOM	HBG717285.
OMA	MAFTEWI.
OrthoDB	EOG48SM27.
Family and domain databases
InterPro	IPR015194. ATPase_nucl-remodel_HAND-dom. IPR014001. DEAD-like_helicase. IPR001650. Helicase_C. IPR009057. Homeodomain-like. IPR001005. SANT_DNA-bd. IPR017884. SANT_eukarya. IPR015195. SLIDE. IPR000330. SNF2_N. [Graphical view]
Pfam	PF09110. HAND. 1 hit. PF00271. Helicase_C. 1 hit. PF09111. SLIDE. 1 hit. PF00176. SNF2_N. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. SM00717. SANT. 2 hits. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 2 hits. SSF101224. Nucl_remodel_ATPase_ISWI_HAND. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS51293. SANT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5KCR8_CRYNJ

Accession

Primary (citable) accession number: Q5KCR8

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 16, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)