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Protein

Glutamate decarboxylase

Gene

CNH03700

Organism
Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:CNH03700Imported, CNL03700Imported
OrganismiCryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans)Imported
Taxonomic identifieri214684 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaTremellomycetesTremellalesTremellaceaeFilobasidiellaFilobasidiella/Cryptococcus neoformans species complex
ProteomesiUP000002149: Chromosome 12, UP000002149: Chromosome 8

Interactioni

Protein-protein interaction databases

STRINGi214684.CNL03700.

Structurei

3D structure databases

ProteinModelPortaliQ5K920.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiRYFDVEN.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5K920-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALSQHVDAD KLIEECKDHP IKRHLSHKAA LYDIPYTSRY EVEDEVPRYR
60 70 80 90 100
LPSKGVNGRA TYQLLHDELM LDGNPNMNLA SFVHTWVPDE CNRLVQENIN
110 120 130 140 150
KNLVDQDEYP AAQQIHERCI SMLSHLWHAP KEATAMGTAT TGSSEAIMLG
160 170 180 190 200
GLALKRRWQE KMKAAGKDIH NPGPNIVMGA EAQVALEKFA RYFEVEARLV
210 220 230 240 250
PIKPESSYVM DPKDVLKYVD ENTIGVFVIL GSTYTGAFES VKDVAQELDK
260 270 280 290 300
YEAETGISVP IHVDAASGGF VAPFAYPHYQ WDFQIPRVHS INASGHKYGM
310 320 330 340 350
STVGVGWIIW RSMEYLPKEL IFELHYLGAT DYSFNLNFSR PAHPILAQMF
360 370 380 390 400
TFLNLGFEGY KRIMDKNLTV ARLISRALEH SGYFICLSKI HHPKALTESS
410 420 430 440 450
SSAEQSNILP AVADAANTVL HGKKTTVDDA EYYCEGLPVV SFMFTDEIKK
460 470 480 490 500
KYPGVKQAWI QMQLRSIGWI VPNYPLAPDC EKTEILRVVV RESLSGDLAR
510 520 530 540 550
KLIHDILQVT EDLLNDAGPS YSMSTATRRH ENLDHGKLDN IDAVHIKQHT

STYSKPC
Length:557
Mass (Da):62,717
Last modified:February 15, 2005 - v1
Checksum:iA50822786EF33701
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017348 Genomic DNA. Translation: AAW45225.1.
AE017352 Genomic DNA. Translation: AAW46416.1.
RefSeqiXP_567933.1. XM_567933.1.
XP_572532.1. XM_572532.1.
UniGeneiFne.6965.
Fne.7297.

Genome annotation databases

EnsemblFungiiAAW45225; AAW45225; CNH03700.
AAW46416; AAW46416; CNL03700.
GeneIDi3254998.
3259079.
KEGGicne:CNH03700.
cne:CNL03700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017348 Genomic DNA. Translation: AAW45225.1.
AE017352 Genomic DNA. Translation: AAW46416.1.
RefSeqiXP_567933.1. XM_567933.1.
XP_572532.1. XM_572532.1.
UniGeneiFne.6965.
Fne.7297.

3D structure databases

ProteinModelPortaliQ5K920.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi214684.CNL03700.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiAAW45225; AAW45225; CNH03700.
AAW46416; AAW46416; CNL03700.
GeneIDi3254998.
3259079.
KEGGicne:CNH03700.
cne:CNL03700.

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiRYFDVEN.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Loftus B., Amedeo P., Roncaglia P., Vamathevan J., Utterback T., Van Aken S., Fraser C.
    Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: JEC21.
  2. "The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans."
    Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S.
    , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J., Koo H.L., Krzywinski M.I., Kwon-Chung J.K., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W.
    Science 307:1321-1324(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JEC21Imported and JEC21 / ATCC MYA-565Imported.

Entry informationi

Entry nameiQ5K920_CRYNJ
AccessioniPrimary (citable) accession number: Q5K920
Secondary accession number(s): Q55LQ3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: February 4, 2015
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.