Q5K8L9 (Q5K8L9_CRYNJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative EMBL AAW46542.1

Gene names

Ordered Locus Names:

CNL05190

Organism

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans)

Taxonomic identifier

214684 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Tremellomycetes › Tremellales › Tremellaceae › Filobasidiella › Filobasidiella/Cryptococcus neoformans species complex

Protein attributes

Sequence length	900 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000353
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro helicase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5K8L9 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: F570516153ADFEE5	FASTA	900	99,414
	10 20 30 40 50 60 MSHIDYFGGQ PSTAQKRPRQ TQPTSSSQEE DDDQQSRAIE HDEHFATFRS DVVGVQYYRG 70 80 90 100 110 120 LVGRGEYVLL RREPTNKWDS NAVQVVNAGG SQVGHIPRAV AANLATLMDR NQISVEGRMI 130 140 150 160 170 180 GQNLDGAKHF KLPLDVSIYL NHSMRESLEP ALRWVSPGDR VNNQARRPVY TSQSQVRGAA 190 200 210 220 230 240 GSGVGLPQPA DSTMKELLEG LSKDNADLKQ VDKVMDALTS DVDVSKLPLH PAPPGTANGQ 250 260 270 280 290 300 LLTDLLPHQS QALQWMITRE NPQLPKSPSE PAVQFWVKQK GVGSKPDYWL NVATKTPQSE 310 320 330 340 350 360 APQLGRGGII ADGMGLGKTL TTISLVLATK NDPVGDKVSK STLIVCPLSV LSNWEKQIRD 370 380 390 400 410 420 HVAPSQLRFY TYHGAAKGLT AKKLGGYDIV LTTYQTVAGE DAAVPHTGDT PLAKKSRPST 430 440 450 460 470 480 TKSGPLATIK WKRVVADEGH QLKNPKAKMT IAFANLSAER RWICTGTPIV NSPNDLGSLL 490 500 510 520 530 540 TCLHICAPLS NPQYFRALLL RPLSRGDPTA SKLLQAVVSQ ILLRRTKDSK GANGENVVEL 550 560 570 580 590 600 PDIEFFRVPV KLDNETRKVY EEVLEHSKRR FEETLRTGEG AANVLSMLTR MRQLCLSLEL 610 620 630 640 650 660 IPQSFLDEIR APPTSQNGAS ATSIASLSTE EMEALVKKLR QIVEDETECG ICMDEVEFAK 670 680 690 700 710 720 DPAITDCGHP FCLPCIERVI TSQGLCPMDR HPIAHGSILR LPSDESLYLP SSQARSINSA 730 740 750 760 770 780 KIDELVKYLR IFPRDDKTLV FSQFTSFLDC VGVRLEQEGV KFVRFDGRMP GKQRTEVIKA 790 800 810 820 830 840 FQEPVKGDDD EEAPTVMLIS LKSGAVGLNL TAASNVFLCD PWWQSAIEAQ AIDRAHRMGQ 850 860 870 880 890 900 KKVVRVFQLI AEDTIESRVL DIQKRKDAMV AKAFEKSSKE SQRTKKEARF EDIKELLGMK

References

[1]

"The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans." Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D., Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E., Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A., Fox D.S. , Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C., Janbon G., Jones S.J.M., Koo H.L., Krzywinski M.I., Kwon-Chung K.J., Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A., Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E., Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A., Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W., Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W. Science 307:1321-1324(2005) [PubMed: 15653466] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JEC21 / ATCC MYA-565.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017352 Genomic DNA. Translation: AAW46542.1.
RefSeq	XP_568059.1. XM_568059.1.
3D structure databases
ProteinModelPortal	Q5K8L9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3254749.
GenomeReviews	Gene locus CNL05190 in contig AE017352_GR.
KEGG	cne:CNL05190.
Phylogenomic databases
HOGENOM	HBG068682.
OMA	VEDETEC.
OrthoDB	EOG4G1QQQ.
Family and domain databases
InterPro	IPR014001. DEAD-like_helicase. IPR001650. Helicase_C. IPR014905. HIP116_Rad5p_N. IPR000330. SNF2_N. IPR018957. Znf_C3HC4_RING-type. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view]
Gene3D	G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
Pfam	PF00271. Helicase_C. 1 hit. PF08797. HIRAN. 1 hit. PF00176. SNF2_N. 1 hit. PF00097. zf-C3HC4. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. SM00910. HIRAN. 1 hit. SM00184. RING. 1 hit. [Graphical view]
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5K8L9_CRYNJ

Accession

Primary (citable) accession number: Q5K8L9

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 16, 2011
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)