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Q5K037 (NSP3_ROTGA) Reviewed, UniProtKB/Swiss-Prot

Last modified November 28, 2012. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Non-structural protein 3

Short name=NSP3
OrganismRotavirus B (isolate Human/China/ADRV/1982) (RV-B) (Rotavirus B (isolate adult diarrhea rotavirus))
Taxonomic identifier10942 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length347 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the rotavirus B NSP3 family.

Sequence caution

The sequence AAA47329.1 differs from that shown. Reason: Frameshift at position 316.

Ontologies

Keywords
   DomainCoiled coil
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 347347Non-structural protein 3
PRO_0000369848

Regions

Coiled coil130 – 263134 Potential
Coiled coil317 – 34630 Potential

Experimental info

Sequence conflict1681N → S in AAA47329. Ref.2
Sequence conflict2481E → G in AAA47329. Ref.2
Sequence conflict2811L → H in AAA47329. Ref.2
Sequence conflict2921N → S in AAA47329. Ref.2

Sequences

Sequence LengthMass (Da)Tools
Q5K037 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: F99CB0E39BB51A98

FASTA34740,357
        10         20         30         40         50         60 
MALDALASIL ETVLRNCGIN EISRVTTKFE EALDDCGMKV DDWREAYYKE RFPKRMTATT 

        70         80         90        100        110        120 
MASQIMNFEI ENLQLRNKAW AEGADRKFRL LSSFEIGNKD GHTILVPKTR NAEILLANST 

       130        140        150        160        170        180 
SDLKLSSFPS EAVAKLAEEN EKMRKQIEHL REQQTSKSTA TLCEALENMT ERMKLIEREK 

       190        200        210        220        230        240 
ETVRRMFLEC DKTNQRLRKQ IQICEEEATD RLVLVNSHHR EEILIMKREI YRLQMENVTL 

       250        260        270        280        290        300 
KEQIDSIEQE LDHSNRIVRG LANRAGLVVD EVDSGNETSD LSDDSDHDDH ENSESDLEDM 

       310        320        330        340 
MDPGEDERIP RGGENPRRQA RMLQMREEME RLHEDMEILN LNLDLDI 

« Hide

References

[1]"Primary identification of the seventh RNA segment of the group B rotavirus ADRV."
Mackow E.R., Chen G., Werner R., Fay M.E., Tao H.
Submitted (SEP-1992) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"The evolution of human group B rotaviruses: correction and an update."
Jiang B., Wang Y., Glass R.I., Fang Z.-Y.
J. Clin. Virol. 34:158-159(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M91436 mRNA. Translation: AAA47329.1. Frameshift.
AJ867610 Genomic RNA. Translation: CAI30288.1.

3D structure databases

ProteinModelPortalQ5K037.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ5K037.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameNSP3_ROTGA
AccessionPrimary (citable) accession number: Q5K037
Secondary accession number(s): Q86196
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: February 15, 2005
Last modified: November 28, 2012
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families