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Q5JVV3

- Q5JVV3_HUMAN

UniProt

Q5JVV3 - Q5JVV3_HUMAN

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Protein
Submitted name:

Actin-binding LIM protein 1

Gene

ABLIM1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. cytoskeleton organization Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Actin-binding LIM protein 1Imported
Gene namesi
Name:ABLIM1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 10

Organism-specific databases

HGNCiHGNC:78. ABLIM1.

PTM / Processingi

Proteomic databases

PRIDEiQ5JVV3.

Structurei

3D structure databases

ProteinModelPortaliQ5JVV3.
SMRiQ5JVV3. Positions 1-28, 466-530.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000285997.
HOVERGENiHBG031499.

Family and domain databases

Gene3Di1.10.950.10. 1 hit.
InterProiIPR028448. ABLIM1.
IPR003128. Villin_headpiece.
[Graphical view]
PANTHERiPTHR24213:SF18. PTHR24213:SF18. 1 hit.
PfamiPF02209. VHP. 1 hit.
[Graphical view]
SMARTiSM00153. VHP. 1 hit.
[Graphical view]
SUPFAMiSSF47050. SSF47050. 1 hit.
PROSITEiPS51089. HP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5JVV3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFTEGEEMYL QGSTVWHPDC KQSTKTEEKL RLPNIRRSSS DFFYSKSLIR
60 70 80 90 100
RTGRSPSLQP TRTSSESIYS RPGSSIPGSP GHTIYAKVDN EILDYKDLAA
110 120 130 140 150
IPKVKAIYDI ERPDLITYEP FYTSGYDDKQ ERQSLGESPR TLSPTPSAEG
160 170 180 190 200
YQDVRDRMIH RSTSQGSINS PVYSRHSYTP TTSRSPQHFH RPELLSPGVQ
210 220 230 240 250
RLSYLRTSSL SPTHSDSRPN PPFRHHFIPH IKGNEPSSGR NSPLPYRPDS
260 270 280 290 300
RPLTPTYAQA PKHFHVPDQG INIYRKPPIY KQHAALAAQS KSSEDIIKFS
310 320 330 340 350
KFPAAQAPDP SETPKIETDH WPGPPSFAVV GPDMKRRSSG REEDDEELLR
360 370 380 390 400
RRQLQEEQLM KLNSGLGQLI LKEEMEKESR ERSSLLASRY DSPINSASHI
410 420 430 440 450
PSSKTASLPG YGRNGLHRPV STDFAQYNSY GDVSGGVRDY QTLPDGHMPA
460 470 480 490 500
MRMDRGVSMP NMLEPKIFPY EMLMVTNRGR NKILREVDRT RLERHLAPEV
510 520 530
FREIFGMSIQ EFDRLPLWRR NDMKKKAKLF
Length:530
Mass (Da):60,498
Last modified:February 15, 2005 - v1
Checksum:iEB83BBD2B8EA0F14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133384 Genomic DNA. No translation available.
AL354873 Genomic DNA. No translation available.
AL590109 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000369253; ENSP00000358257; ENSG00000099204.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133384 Genomic DNA. No translation available.
AL354873 Genomic DNA. No translation available.
AL590109 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali Q5JVV3.
SMRi Q5JVV3. Positions 1-28, 466-530.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q5JVV3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000369253 ; ENSP00000358257 ; ENSG00000099204 .

Organism-specific databases

HGNCi HGNC:78. ABLIM1.
GenAtlasi Search...

Phylogenomic databases

HOGENOMi HOG000285997.
HOVERGENi HBG031499.

Miscellaneous databases

ChiTaRSi ABLIM1. human.
NextBioi 35539328.

Family and domain databases

Gene3Di 1.10.950.10. 1 hit.
InterProi IPR028448. ABLIM1.
IPR003128. Villin_headpiece.
[Graphical view ]
PANTHERi PTHR24213:SF18. PTHR24213:SF18. 1 hit.
Pfami PF02209. VHP. 1 hit.
[Graphical view ]
SMARTi SM00153. VHP. 1 hit.
[Graphical view ]
SUPFAMi SSF47050. SSF47050. 1 hit.
PROSITEi PS51089. HP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry."
    Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C.
    Anal. Chem. 76:2763-2772(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  2. "The DNA sequence and comparative analysis of human chromosome 10."
    Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
    , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
    Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells."
    Rush J., Moritz A., Lee K.A., Guo A., Goss V.L., Spek E.J., Zhang H., Zha X.M., Polakiewicz R.D., Comb M.J.
    Nat. Biotechnol. 23:94-101(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  7. "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
    Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
    Anal. Chem. 81:4493-4501(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  8. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
    Mayya V., Lundgren D.H., Hwang S.I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
    Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  9. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  10. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
    Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
    Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  11. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ5JVV3_HUMAN
AccessioniPrimary (citable) accession number: Q5JVV3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: October 1, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3