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Q5JVV3

- Q5JVV3_HUMAN

UniProt

Q5JVV3 - Q5JVV3_HUMAN

Protein
Submitted name:

Actin-binding LIM protein 1

Gene

ABLIM1

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (15 Feb 2005)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. cytoskeleton organization Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Actin-binding LIM protein 1Imported
    Gene namesi
    Name:ABLIM1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 10

    Organism-specific databases

    HGNCiHGNC:78. ABLIM1.

    PTM / Processingi

    Proteomic databases

    PRIDEiQ5JVV3.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5JVV3.
    SMRiQ5JVV3. Positions 1-28, 466-530.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000285997.
    HOVERGENiHBG031499.

    Family and domain databases

    Gene3Di1.10.950.10. 1 hit.
    InterProiIPR028448. ABLIM1.
    IPR003128. Villin_headpiece.
    [Graphical view]
    PANTHERiPTHR24213:SF18. PTHR24213:SF18. 1 hit.
    PfamiPF02209. VHP. 1 hit.
    [Graphical view]
    SMARTiSM00153. VHP. 1 hit.
    [Graphical view]
    SUPFAMiSSF47050. SSF47050. 1 hit.
    PROSITEiPS51089. HP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5JVV3-1 [UniParc]FASTAAdd to Basket

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    MFTEGEEMYL QGSTVWHPDC KQSTKTEEKL RLPNIRRSSS DFFYSKSLIR    50
    RTGRSPSLQP TRTSSESIYS RPGSSIPGSP GHTIYAKVDN EILDYKDLAA 100
    IPKVKAIYDI ERPDLITYEP FYTSGYDDKQ ERQSLGESPR TLSPTPSAEG 150
    YQDVRDRMIH RSTSQGSINS PVYSRHSYTP TTSRSPQHFH RPELLSPGVQ 200
    RLSYLRTSSL SPTHSDSRPN PPFRHHFIPH IKGNEPSSGR NSPLPYRPDS 250
    RPLTPTYAQA PKHFHVPDQG INIYRKPPIY KQHAALAAQS KSSEDIIKFS 300
    KFPAAQAPDP SETPKIETDH WPGPPSFAVV GPDMKRRSSG REEDDEELLR 350
    RRQLQEEQLM KLNSGLGQLI LKEEMEKESR ERSSLLASRY DSPINSASHI 400
    PSSKTASLPG YGRNGLHRPV STDFAQYNSY GDVSGGVRDY QTLPDGHMPA 450
    MRMDRGVSMP NMLEPKIFPY EMLMVTNRGR NKILREVDRT RLERHLAPEV 500
    FREIFGMSIQ EFDRLPLWRR NDMKKKAKLF 530
    Length:530
    Mass (Da):60,498
    Last modified:February 15, 2005 - v1
    Checksum:iEB83BBD2B8EA0F14
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL133384 Genomic DNA. No translation available.
    AL354873 Genomic DNA. No translation available.
    AL590109 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000369253; ENSP00000358257; ENSG00000099204.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL133384 Genomic DNA. No translation available.
    AL354873 Genomic DNA. No translation available.
    AL590109 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali Q5JVV3.
    SMRi Q5JVV3. Positions 1-28, 466-530.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q5JVV3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000369253 ; ENSP00000358257 ; ENSG00000099204 .

    Organism-specific databases

    HGNCi HGNC:78. ABLIM1.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000285997.
    HOVERGENi HBG031499.

    Miscellaneous databases

    ChiTaRSi ABLIM1. human.
    NextBioi 35539328.

    Family and domain databases

    Gene3Di 1.10.950.10. 1 hit.
    InterProi IPR028448. ABLIM1.
    IPR003128. Villin_headpiece.
    [Graphical view ]
    PANTHERi PTHR24213:SF18. PTHR24213:SF18. 1 hit.
    Pfami PF02209. VHP. 1 hit.
    [Graphical view ]
    SMARTi SM00153. VHP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47050. SSF47050. 1 hit.
    PROSITEi PS51089. HP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry."
      Brill L.M., Salomon A.R., Ficarro S.B., Mukherji M., Stettler-Gill M., Peters E.C.
      Anal. Chem. 76:2763-2772(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    2. "The DNA sequence and comparative analysis of human chromosome 10."
      Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J.
      , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
      Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells."
      Rush J., Moritz A., Lee K.A., Guo A., Goss V.L., Spek E.J., Zhang H., Zha X.M., Polakiewicz R.D., Comb M.J.
      Nat. Biotechnol. 23:94-101(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    5. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    7. "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
      Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
      Anal. Chem. 81:4493-4501(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    8. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
      Mayya V., Lundgren D.H., Hwang S.I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
      Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    9. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
      Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
      Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    10. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
      Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
      Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    11. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiQ5JVV3_HUMAN
    AccessioniPrimary (citable) accession number: Q5JVV3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 15, 2005
    Last sequence update: February 15, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3