Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q5JUR7

- TEX30_HUMAN

UniProt

Q5JUR7 - TEX30_HUMAN

Protein

Testis-expressed sequence 30 protein

Gene

TEX30

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 1 (15 Feb 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Testis-expressed sequence 30 protein
    Gene namesi
    Name:TEX30
    Synonyms:C13orf27
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 13

    Organism-specific databases

    HGNCiHGNC:25188. TEX30.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA147358470.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 227227Testis-expressed sequence 30 proteinPRO_0000274312Add
    BLAST

    Proteomic databases

    MaxQBiQ5JUR7.
    PaxDbiQ5JUR7.
    PRIDEiQ5JUR7.

    PTM databases

    PhosphoSiteiQ5JUR7.

    Expressioni

    Gene expression databases

    ArrayExpressiQ5JUR7.
    BgeeiQ5JUR7.
    CleanExiHS_C13orf27.
    GenevestigatoriQ5JUR7.

    Organism-specific databases

    HPAiHPA053545.

    Interactioni

    Protein-protein interaction databases

    BioGridi124998. 4 interactions.
    STRINGi9606.ENSP00000365199.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5JUR7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3571.
    HOGENOMiHOG000006654.
    HOVERGENiHBG081256.
    InParanoidiQ5JUR7.
    OMAiYPLHRPK.
    OrthoDBiEOG7DC25Q.
    PhylomeDBiQ5JUR7.
    TreeFamiTF332335.

    Family and domain databases

    Gene3Di3.40.50.1820. 1 hit.
    InterProiIPR029058. AB_hydrolase.
    IPR029059. AB_hydrolase_5.
    IPR026555. NSL3/Tex30.
    [Graphical view]
    PANTHERiPTHR13136. PTHR13136. 1 hit.
    PfamiPF12695. Abhydrolase_5. 1 hit.
    [Graphical view]
    SUPFAMiSSF53474. SSF53474. 1 hit.

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q5JUR7-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MSHTEVKLKI PFGNKLLDAV CLVPNKSLTY GIILTHGASG DMNLPHLMSL    50
    ASHLASHGFF CLRFTCKGLN IVHRIKAYKS VLNYLKTSGE YKLAGVFLGG 100
    RSMGSRAAAS VMCHIEPDDG DDFVRGLICI SYPLHHPKQQ HKLRDEDLFR 150
    LKEPVLFVSG SADEMCEKNL LEKVAQKMQA PHKIHWIEKA NHSMAVKGRS 200
    TNDVFKEINT QILFWIQEIT EMDKKCH 227
    Length:227
    Mass (Da):25,585
    Last modified:February 15, 2005 - v1
    Checksum:iB37C06A38A91E774
    GO
    Isoform 2 (identifier: Q5JUR7-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         100-113: GRSMGSRAAASVMC → ELVGESGTENASSP
         114-227: Missing.

    Note: No experimental confirmation available. Gene prediction based on EST data.

    Show »
    Length:113
    Mass (Da):12,220
    Checksum:i6C724738FA56E3E2
    GO

    Sequence cautioni

    The sequence AAH15148.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei100 – 11314GRSMG…ASVMC → ELVGESGTENASSP in isoform 2. CuratedVSP_055706Add
    BLAST
    Alternative sequencei114 – 227114Missing in isoform 2. CuratedVSP_055707Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL157769 Genomic DNA. No translation available.
    BC015148 mRNA. Translation: AAH15148.2. Different initiation.
    CCDSiCCDS9503.2.
    RefSeqiNP_001273704.1. NM_001286775.1.
    NP_001273705.1. NM_001286776.1.
    NP_620134.3. NM_138779.4.
    XP_005254154.1. XM_005254097.1.
    UniGeneiHs.398111.

    Genome annotation databases

    EnsembliENST00000376019; ENSP00000365187; ENSG00000151287.
    ENST00000376021; ENSP00000365189; ENSG00000151287.
    ENST00000376027; ENSP00000365195; ENSG00000151287. [Q5JUR7-2]
    ENST00000376029; ENSP00000365197; ENSG00000151287. [Q5JUR7-2]
    ENST00000376032; ENSP00000365200; ENSG00000151287. [Q5JUR7-1]
    GeneIDi93081.
    KEGGihsa:93081.
    UCSCiuc001vpn.3. human.

    Polymorphism databases

    DMDMi74742331.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL157769 Genomic DNA. No translation available.
    BC015148 mRNA. Translation: AAH15148.2 . Different initiation.
    CCDSi CCDS9503.2.
    RefSeqi NP_001273704.1. NM_001286775.1.
    NP_001273705.1. NM_001286776.1.
    NP_620134.3. NM_138779.4.
    XP_005254154.1. XM_005254097.1.
    UniGenei Hs.398111.

    3D structure databases

    ProteinModelPortali Q5JUR7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 124998. 4 interactions.
    STRINGi 9606.ENSP00000365199.

    Chemistry

    ChEMBLi CHEMBL2189125.

    PTM databases

    PhosphoSitei Q5JUR7.

    Polymorphism databases

    DMDMi 74742331.

    Proteomic databases

    MaxQBi Q5JUR7.
    PaxDbi Q5JUR7.
    PRIDEi Q5JUR7.

    Protocols and materials databases

    DNASUi 93081.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000376019 ; ENSP00000365187 ; ENSG00000151287 .
    ENST00000376021 ; ENSP00000365189 ; ENSG00000151287 .
    ENST00000376027 ; ENSP00000365195 ; ENSG00000151287 . [Q5JUR7-2 ]
    ENST00000376029 ; ENSP00000365197 ; ENSG00000151287 . [Q5JUR7-2 ]
    ENST00000376032 ; ENSP00000365200 ; ENSG00000151287 . [Q5JUR7-1 ]
    GeneIDi 93081.
    KEGGi hsa:93081.
    UCSCi uc001vpn.3. human.

    Organism-specific databases

    CTDi 93081.
    GeneCardsi GC13M103419.
    HGNCi HGNC:25188. TEX30.
    HPAi HPA053545.
    neXtProti NX_Q5JUR7.
    PharmGKBi PA147358470.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi COG3571.
    HOGENOMi HOG000006654.
    HOVERGENi HBG081256.
    InParanoidi Q5JUR7.
    OMAi YPLHRPK.
    OrthoDBi EOG7DC25Q.
    PhylomeDBi Q5JUR7.
    TreeFami TF332335.

    Miscellaneous databases

    GenomeRNAii 93081.
    NextBioi 77963.
    PROi Q5JUR7.

    Gene expression databases

    ArrayExpressi Q5JUR7.
    Bgeei Q5JUR7.
    CleanExi HS_C13orf27.
    Genevestigatori Q5JUR7.

    Family and domain databases

    Gene3Di 3.40.50.1820. 1 hit.
    InterProi IPR029058. AB_hydrolase.
    IPR029059. AB_hydrolase_5.
    IPR026555. NSL3/Tex30.
    [Graphical view ]
    PANTHERi PTHR13136. PTHR13136. 1 hit.
    Pfami PF12695. Abhydrolase_5. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53474. SSF53474. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and analysis of human chromosome 13."
      Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
      Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
      Tissue: Testis.

    Entry informationi

    Entry nameiTEX30_HUMAN
    AccessioniPrimary (citable) accession number: Q5JUR7
    Secondary accession number(s): Q5JUR8, Q96KZ8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 6, 2007
    Last sequence update: February 15, 2005
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 13
      Human chromosome 13: entries, gene names and cross-references to MIM

    External Data

    Dasty 3