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Q5JUR7 (TEX30_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Testis-expressed sequence 30 protein
Gene names
Name:TEX30
Synonyms:C13orf27
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length227 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence caution

The sequence AAH15148.2 differs from that shown. Reason: Erroneous initiation.

The sequence CAI14521.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 227227Testis-expressed sequence 30 protein
PRO_0000274312

Sequences

Sequence LengthMass (Da)Tools
Q5JUR7 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: B37C06A38A91E774

FASTA22725,585
        10         20         30         40         50         60 
MSHTEVKLKI PFGNKLLDAV CLVPNKSLTY GIILTHGASG DMNLPHLMSL ASHLASHGFF 

        70         80         90        100        110        120 
CLRFTCKGLN IVHRIKAYKS VLNYLKTSGE YKLAGVFLGG RSMGSRAAAS VMCHIEPDDG 

       130        140        150        160        170        180 
DDFVRGLICI SYPLHHPKQQ HKLRDEDLFR LKEPVLFVSG SADEMCEKNL LEKVAQKMQA 

       190        200        210        220 
PHKIHWIEKA NHSMAVKGRS TNDVFKEINT QILFWIQEIT EMDKKCH 

« Hide

References

[1]"The DNA sequence and analysis of human chromosome 13."
Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. expand/collapse author list , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL157769 Genomic DNA. Translation: CAI14521.1. Sequence problems.
AL157769 Genomic DNA. Translation: CAI14524.1.
BC015148 mRNA. Translation: AAH15148.2. Different initiation.
RefSeqNP_001273704.1. NM_001286775.1.
NP_001273705.1. NM_001286776.1.
NP_620134.3. NM_138779.4.
XP_005254154.1. XM_005254097.1.
UniGeneHs.398111.

3D structure databases

ProteinModelPortalQ5JUR7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid124998. 2 interactions.
STRING9606.ENSP00000365199.

Chemistry

ChEMBLCHEMBL2189125.

PTM databases

PhosphoSiteQ5JUR7.

Polymorphism databases

DMDM74742331.

Proteomic databases

PaxDbQ5JUR7.
PRIDEQ5JUR7.

Protocols and materials databases

DNASU93081.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000376019; ENSP00000365187; ENSG00000151287.
ENST00000376021; ENSP00000365189; ENSG00000151287.
ENST00000376032; ENSP00000365200; ENSG00000151287.
GeneID93081.
KEGGhsa:93081.
UCSCuc001vpn.3. human.

Organism-specific databases

CTD93081.
GeneCardsGC13M103419.
HGNCHGNC:25188. TEX30.
HPAHPA053545.
neXtProtNX_Q5JUR7.
PharmGKBPA147358470.
GenAtlasSearch...

Phylogenomic databases

eggNOGCOG3571.
HOGENOMHOG000006654.
HOVERGENHBG081256.
InParanoidQ5JUR7.
OMAYPLHRPK.
OrthoDBEOG7DC25Q.
PhylomeDBQ5JUR7.
TreeFamTF332335.

Gene expression databases

ArrayExpressQ5JUR7.
BgeeQ5JUR7.
CleanExHS_C13orf27.
GenevestigatorQ5JUR7.

Family and domain databases

InterProIPR026555. NSL3/Tex30.
[Graphical view]
PANTHERPTHR13136. PTHR13136. 1 hit.
ProtoNetSearch...

Other

GenomeRNAi93081.
NextBio77963.
PROQ5JUR7.

Entry information

Entry nameTEX30_HUMAN
AccessionPrimary (citable) accession number: Q5JUR7
Secondary accession number(s): Q96KZ8
Entry history
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 15, 2005
Last modified: April 16, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 13

Human chromosome 13: entries, gene names and cross-references to MIM