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Protein

Putative KHDC1-like protein

Gene

KHDC1L

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative KHDC1-like protein
Gene namesi
Name:KHDC1L
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 6

Organism-specific databases

HGNCiHGNC:37274. KHDC1L.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165617988.

Polymorphism and mutation databases

BioMutaiKHDC1L.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 128128Putative KHDC1-like proteinPRO_0000395326Add
BLAST

Proteomic databases

PRIDEiQ5JSQ8.

Expressioni

Gene expression databases

BgeeiQ5JSQ8.

Structurei

3D structure databases

ProteinModelPortaliQ5JSQ8.
SMRiQ5JSQ8. Positions 9-95.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the KHDC1 family.Curated

Phylogenomic databases

eggNOGiNOG84076.
GeneTreeiENSGT00390000008575.
HOGENOMiHOG000037926.
HOVERGENiHBG056258.
InParanoidiQ5JSQ8.
OMAiYLRCIEL.

Sequencei

Sequence statusi: Complete.

Q5JSQ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVGTSALSK EPWWTLPENF HSPMVFHMEE DQEELIFGLD DTYLRCIELH
60 70 80 90 100
SHTLIQLERC FTATGQTRVT VVGPPMAKQW LLLMFHCVGS QDSKCHARGL
110 120
KMLERVRSQP LTNDDLVTSV SLPPYTGD
Length:128
Mass (Da):14,546
Last modified:February 15, 2005 - v1
Checksum:i68E0AC61F410DA27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL365232 Genomic DNA. Translation: CAI39830.1.
CH471051 Genomic DNA. Translation: EAW48776.1.
CH471051 Genomic DNA. Translation: EAW48777.1.
CH471051 Genomic DNA. Translation: EAW48779.1.
BC004267 mRNA. No translation available.
CCDSiCCDS47450.1.
RefSeqiNP_001119535.1. NM_001126063.2.
UniGeneiHs.433062.
Hs.663639.
Hs.732094.

Genome annotation databases

EnsembliENST00000370388; ENSP00000359415; ENSG00000256980.
GeneIDi100129128.
KEGGihsa:100129128.
UCSCiuc003pgm.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL365232 Genomic DNA. Translation: CAI39830.1.
CH471051 Genomic DNA. Translation: EAW48776.1.
CH471051 Genomic DNA. Translation: EAW48777.1.
CH471051 Genomic DNA. Translation: EAW48779.1.
BC004267 mRNA. No translation available.
CCDSiCCDS47450.1.
RefSeqiNP_001119535.1. NM_001126063.2.
UniGeneiHs.433062.
Hs.663639.
Hs.732094.

3D structure databases

ProteinModelPortaliQ5JSQ8.
SMRiQ5JSQ8. Positions 9-95.
ModBaseiSearch...
MobiDBiSearch...

Polymorphism and mutation databases

BioMutaiKHDC1L.

Proteomic databases

PRIDEiQ5JSQ8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000370388; ENSP00000359415; ENSG00000256980.
GeneIDi100129128.
KEGGihsa:100129128.
UCSCiuc003pgm.4. human.

Organism-specific databases

CTDi100129128.
GeneCardsiGC06M073933.
HGNCiHGNC:37274. KHDC1L.
neXtProtiNX_Q5JSQ8.
PharmGKBiPA165617988.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG84076.
GeneTreeiENSGT00390000008575.
HOGENOMiHOG000037926.
HOVERGENiHBG056258.
InParanoidiQ5JSQ8.
OMAiYLRCIEL.

Miscellaneous databases

GenomeRNAii100129128.
NextBioi20771971.

Gene expression databases

BgeeiQ5JSQ8.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and analysis of human chromosome 6."
    Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
    , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
    Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Uterus.

Entry informationi

Entry nameiKHDCL_HUMAN
AccessioniPrimary (citable) accession number: Q5JSQ8
Secondary accession number(s): E1P535
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 13, 2010
Last sequence update: February 15, 2005
Last modified: April 29, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Product of a dubious gene prediction.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 6
    Human chromosome 6: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.