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Q5JQF7

- CF100_HUMAN

UniProt

Q5JQF7 - CF100_HUMAN

Protein

Putative uncharacterized protein C6orf100

Gene

C6orf100

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein C6orf100
    Gene namesi
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 6

    Organism-specific databases

    HGNCiHGNC:21195. C6orf100.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6262Putative uncharacterized protein C6orf100PRO_0000309188Add
    BLAST

    Proteomic databases

    PaxDbiQ5JQF7.
    PRIDEiQ5JQF7.

    PTM databases

    PhosphoSiteiQ5JQF7.

    Expressioni

    Gene expression databases

    GenevestigatoriQ5JQF7.

    Organism-specific databases

    HPAiHPA043694.

    Interactioni

    Protein-protein interaction databases

    STRINGi9606.ENSP00000394134.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5JQF7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG71562.
    InParanoidiQ5JQF7.
    OMAiTSAWILM.
    OrthoDBiEOG7Q5HH6.
    PhylomeDBiQ5JQF7.
    TreeFamiTF341497.

    Sequencei

    Sequence statusi: Complete.

    Q5JQF7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLQVVQEGNP APFIINTVKR GRRDRERQRT PWAPHPLGFQ GRRYIYESPN   50
    HRGKDSSFLA QK 62
    Length:62
    Mass (Da):7,289
    Last modified:June 28, 2011 - v2
    Checksum:iC9080538DCB47379
    GO

    Sequence cautioni

    The sequence CAC69878.1 differs from that shown. Reason: Erroneous initiation.

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti41 – 411G → E.
    Corresponds to variant rs2071790 [ dbSNP | Ensembl ].
    VAR_036902

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX927167 Genomic DNA. Translation: CAQ07639.1.
    Z84476 Genomic DNA. Translation: CAC69878.1. Different initiation.
    AL662871 Genomic DNA. Translation: CAI18382.1.
    AL954865 Genomic DNA. Translation: CAI18573.1.
    AL662865 Genomic DNA. Translation: CAI41639.1.
    BX248109 Genomic DNA. Translation: CAM26172.1.
    CR936883 Genomic DNA. Translation: CAQ09809.1.
    UniGeneiHs.453549.

    Genome annotation databases

    EnsembliENST00000377186; ENSP00000366391; ENSG00000204709.
    ENST00000383656; ENSP00000373152; ENSG00000206526.
    ENST00000421470; ENSP00000410635; ENSG00000231041.
    ENST00000434916; ENSP00000394134; ENSG00000237313.
    ENST00000438403; ENSP00000401725; ENSG00000233566.
    ENST00000438996; ENSP00000396675; ENSG00000237634.

    Keywords - Coding sequence diversityi

    Polymorphism

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX927167 Genomic DNA. Translation: CAQ07639.1 .
    Z84476 Genomic DNA. Translation: CAC69878.1 . Different initiation.
    AL662871 Genomic DNA. Translation: CAI18382.1 .
    AL954865 Genomic DNA. Translation: CAI18573.1 .
    AL662865 Genomic DNA. Translation: CAI41639.1 .
    BX248109 Genomic DNA. Translation: CAM26172.1 .
    CR936883 Genomic DNA. Translation: CAQ09809.1 .
    UniGenei Hs.453549.

    3D structure databases

    ProteinModelPortali Q5JQF7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9606.ENSP00000394134.

    PTM databases

    PhosphoSitei Q5JQF7.

    Proteomic databases

    PaxDbi Q5JQF7.
    PRIDEi Q5JQF7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000377186 ; ENSP00000366391 ; ENSG00000204709 .
    ENST00000383656 ; ENSP00000373152 ; ENSG00000206526 .
    ENST00000421470 ; ENSP00000410635 ; ENSG00000231041 .
    ENST00000434916 ; ENSP00000394134 ; ENSG00000237313 .
    ENST00000438403 ; ENSP00000401725 ; ENSG00000233566 .
    ENST00000438996 ; ENSP00000396675 ; ENSG00000237634 .

    Organism-specific databases

    GeneCardsi GC06P028914.
    GC06Pj28908.
    GC06Pl28912.
    GC06Pm28911.
    GC06Pn28911.
    GC06Po28913.
    HGNCi HGNC:21195. C6orf100.
    HPAi HPA043694.
    neXtProti NX_Q5JQF7.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG71562.
    InParanoidi Q5JQF7.
    OMAi TSAWILM.
    OrthoDBi EOG7Q5HH6.
    PhylomeDBi Q5JQF7.
    TreeFami TF341497.

    Miscellaneous databases

    NextBioi 13620982.

    Gene expression databases

    Genevestigatori Q5JQF7.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence and analysis of human chromosome 6."
      Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
      Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiCF100_HUMAN
    AccessioniPrimary (citable) accession number: Q5JQF7
    Secondary accession number(s): B0S7Y3
    , B0V298, Q5SNN6, Q96KW1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 13, 2007
    Last sequence update: June 28, 2011
    Last modified: October 1, 2014
    This is version 62 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 6
      Human chromosome 6: entries, gene names and cross-references to MIM
    2. Human entries with polymorphisms or disease mutations
      List of human entries with polymorphisms or disease mutations
    3. Human polymorphisms and disease mutations
      Index of human polymorphisms and disease mutations

    External Data

    Dasty 3