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Q5JQF7 (CF100_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized protein C6orf100
Gene names
Name:C6orf100
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length62 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence caution

The sequence CAC69878.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 6262Putative uncharacterized protein C6orf100
PRO_0000309188

Natural variations

Natural variant411G → E.
Corresponds to variant rs2071790 [ dbSNP | Ensembl ].
VAR_036902

Sequences

Sequence LengthMass (Da)Tools
Q5JQF7 [UniParc].

Last modified June 28, 2011. Version 2.
Checksum: C9080538DCB47379

FASTA627,289
        10         20         30         40         50         60 
MLQVVQEGNP APFIINTVKR GRRDRERQRT PWAPHPLGFQ GRRYIYESPN HRGKDSSFLA 


QK 

« Hide

References

[1]"The DNA sequence and analysis of human chromosome 6."
Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. expand/collapse author list , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX927167 Genomic DNA. Translation: CAQ07639.1.
Z84476 Genomic DNA. Translation: CAC69878.1. Different initiation.
AL662871 Genomic DNA. Translation: CAI18382.1.
AL954865 Genomic DNA. Translation: CAI18573.1.
AL662865 Genomic DNA. Translation: CAI41639.1.
BX248109 Genomic DNA. Translation: CAM26172.1.
CR936883 Genomic DNA. Translation: CAQ09809.1.
UniGeneHs.453549.

3D structure databases

ProteinModelPortalQ5JQF7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9606.ENSP00000394134.

PTM databases

PhosphoSiteQ5JQF7.

Proteomic databases

PaxDbQ5JQF7.
PRIDEQ5JQF7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000377186; ENSP00000366391; ENSG00000204709.
ENST00000383656; ENSP00000373152; ENSG00000206526.
ENST00000421470; ENSP00000410635; ENSG00000231041.
ENST00000434916; ENSP00000394134; ENSG00000237313.
ENST00000438403; ENSP00000401725; ENSG00000233566.
ENST00000438996; ENSP00000396675; ENSG00000237634.

Organism-specific databases

GeneCardsGC06P028914.
GC06Pj28908.
GC06Pl28912.
GC06Pm28911.
GC06Pn28911.
GC06Po28913.
HGNCHGNC:21195. C6orf100.
HPAHPA043694.
neXtProtNX_Q5JQF7.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG71562.
InParanoidQ5JQF7.
OMAKCPLAKE.
OrthoDBEOG7Q5HH6.
PhylomeDBQ5JQF7.
TreeFamTF341497.

Gene expression databases

GenevestigatorQ5JQF7.

Family and domain databases

ProtoNetSearch...

Other

NextBio13620982.

Entry information

Entry nameCF100_HUMAN
AccessionPrimary (citable) accession number: Q5JQF7
Secondary accession number(s): B0S7Y3 expand/collapse secondary AC list , B0V298, Q5SNN6, Q96KW1
Entry history
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: June 28, 2011
Last modified: April 16, 2014
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome 6

Human chromosome 6: entries, gene names and cross-references to MIM