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Q5JQF7

- CF100_HUMAN

UniProt

Q5JQF7 - CF100_HUMAN

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Protein
Putative uncharacterized protein C6orf100
Gene
C6orf100
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein C6orf100
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 6

Organism-specific databases

HGNCiHGNC:21195. C6orf100.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6262Putative uncharacterized protein C6orf100
PRO_0000309188Add
BLAST

Proteomic databases

PaxDbiQ5JQF7.
PRIDEiQ5JQF7.

PTM databases

PhosphoSiteiQ5JQF7.

Expressioni

Gene expression databases

GenevestigatoriQ5JQF7.

Organism-specific databases

HPAiHPA043694.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000394134.

Structurei

3D structure databases

ProteinModelPortaliQ5JQF7.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG71562.
InParanoidiQ5JQF7.
OMAiTSAWILM.
OrthoDBiEOG7Q5HH6.
PhylomeDBiQ5JQF7.
TreeFamiTF341497.

Sequencei

Sequence statusi: Complete.

Q5JQF7-1 [UniParc]FASTAAdd to Basket

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MLQVVQEGNP APFIINTVKR GRRDRERQRT PWAPHPLGFQ GRRYIYESPN   50
HRGKDSSFLA QK 62
Length:62
Mass (Da):7,289
Last modified:June 28, 2011 - v2
Checksum:iC9080538DCB47379
GO

Sequence cautioni

The sequence CAC69878.1 differs from that shown. Reason: Erroneous initiation.

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti41 – 411G → E.
Corresponds to variant rs2071790 [ dbSNP | Ensembl ].
VAR_036902

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX927167 Genomic DNA. Translation: CAQ07639.1.
Z84476 Genomic DNA. Translation: CAC69878.1. Different initiation.
AL662871 Genomic DNA. Translation: CAI18382.1.
AL954865 Genomic DNA. Translation: CAI18573.1.
AL662865 Genomic DNA. Translation: CAI41639.1.
BX248109 Genomic DNA. Translation: CAM26172.1.
CR936883 Genomic DNA. Translation: CAQ09809.1.
UniGeneiHs.453549.

Genome annotation databases

EnsembliENST00000377186; ENSP00000366391; ENSG00000204709.
ENST00000383656; ENSP00000373152; ENSG00000206526.
ENST00000421470; ENSP00000410635; ENSG00000231041.
ENST00000434916; ENSP00000394134; ENSG00000237313.
ENST00000438403; ENSP00000401725; ENSG00000233566.
ENST00000438996; ENSP00000396675; ENSG00000237634.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX927167 Genomic DNA. Translation: CAQ07639.1 .
Z84476 Genomic DNA. Translation: CAC69878.1 . Different initiation.
AL662871 Genomic DNA. Translation: CAI18382.1 .
AL954865 Genomic DNA. Translation: CAI18573.1 .
AL662865 Genomic DNA. Translation: CAI41639.1 .
BX248109 Genomic DNA. Translation: CAM26172.1 .
CR936883 Genomic DNA. Translation: CAQ09809.1 .
UniGenei Hs.453549.

3D structure databases

ProteinModelPortali Q5JQF7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000394134.

PTM databases

PhosphoSitei Q5JQF7.

Proteomic databases

PaxDbi Q5JQF7.
PRIDEi Q5JQF7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000377186 ; ENSP00000366391 ; ENSG00000204709 .
ENST00000383656 ; ENSP00000373152 ; ENSG00000206526 .
ENST00000421470 ; ENSP00000410635 ; ENSG00000231041 .
ENST00000434916 ; ENSP00000394134 ; ENSG00000237313 .
ENST00000438403 ; ENSP00000401725 ; ENSG00000233566 .
ENST00000438996 ; ENSP00000396675 ; ENSG00000237634 .

Organism-specific databases

GeneCardsi GC06P028914.
GC06Pj28908.
GC06Pl28912.
GC06Pm28911.
GC06Pn28911.
GC06Po28913.
HGNCi HGNC:21195. C6orf100.
HPAi HPA043694.
neXtProti NX_Q5JQF7.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG71562.
InParanoidi Q5JQF7.
OMAi TSAWILM.
OrthoDBi EOG7Q5HH6.
PhylomeDBi Q5JQF7.
TreeFami TF341497.

Miscellaneous databases

NextBioi 13620982.

Gene expression databases

Genevestigatori Q5JQF7.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "The DNA sequence and analysis of human chromosome 6."
    Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D.
    , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.
    Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCF100_HUMAN
AccessioniPrimary (citable) accession number: Q5JQF7
Secondary accession number(s): B0S7Y3
, B0V298, Q5SNN6, Q96KW1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: June 28, 2011
Last modified: May 14, 2014
This is version 61 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 6
    Human chromosome 6: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3

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