Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q5JQC4

- CT47A_HUMAN

UniProt

Q5JQC4 - CT47A_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Cancer/testis antigen 47A

Gene

CT47A1

more
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Cancer/testis antigen 47A
Alternative name(s):
Cancer/testis antigen 47
Short name:
CT47
Gene namesi
Name:CT47A1
Synonyms:CT47.1
AND
Name:CT47A2
Synonyms:CT47.2
AND
Name:CT47A3
Synonyms:CT47.3
AND
Name:CT47A4
Synonyms:CT47.4
AND
Name:CT47A5
Synonyms:CT47.5
AND
Name:CT47A6
Synonyms:CT47.6
AND
Name:CT47A7
Synonyms:CT47.7
AND
Name:CT47A8
Synonyms:CT47.8
AND
Name:CT47A9
Synonyms:CT47.9
AND
Name:CT47A10
Synonyms:CT47.10
AND
Name:CT47A11
Synonyms:CT47.11
AND
Name:CT47A12
Synonyms:CT47.12
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome X

Organism-specific databases

HGNCiHGNC:33282. CT47A1.
HGNC:33291. CT47A10.
HGNC:27397. CT47A11.
HGNC:33292. CT47A12.
HGNC:33283. CT47A2.
HGNC:33284. CT47A3.
HGNC:33285. CT47A4.
HGNC:33286. CT47A5.
HGNC:33287. CT47A6.
HGNC:33288. CT47A7.
HGNC:33289. CT47A8.
HGNC:33290. CT47A9.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA164718206.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 288288Cancer/testis antigen 47APRO_0000284450Add
BLAST

Proteomic databases

MaxQBiQ5JQC4.
PaxDbiQ5JQC4.
PeptideAtlasiQ5JQC4.
PRIDEiQ5JQC4.

PTM databases

PhosphoSiteiQ5JQC4.

Expressioni

Tissue specificityi

Strongly expressed in testis, low expression in placenta, and very low expression in brain.1 Publication

Gene expression databases

BgeeiQ5JQC4.
GenevestigatoriQ5JQC4.

Organism-specific databases

HPAiHPA042483.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000360328.

Structurei

3D structure databases

ProteinModelPortaliQ5JQC4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili259 – 28729Sequence AnalysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi92 – 987Poly-Glu

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG130989.
GeneTreeiENSGT00390000002253.
HOGENOMiHOG000112037.
HOVERGENiHBG094803.
InParanoidiQ5JQC4.
OMAiRLSHNDH.
OrthoDBiEOG71CFNT.
PhylomeDBiQ5JQC4.
TreeFamiTF342556.

Family and domain databases

InterProiIPR028930. CT47.
[Graphical view]
PANTHERiPTHR32157. PTHR32157. 1 hit.
PfamiPF15623. CT47. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5JQC4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSATGDRHPT QGDQEAPVSQ EGAQAEAAGA GNQEGGDSGP DSSDVVPAAE
60 70 80 90 100
VVGVAGPVEG LGEEEGEQAA GLAAVPRGGS AEEDSDIGPA TEEEEEEEGN
110 120 130 140 150
EAANFDLAVV ARRYPASGIH FVLLDMVHSL LHRLSHNDHI LIENRQLSRL
160 170 180 190 200
MVGPHAAARN LWGNLPPLLL PQRLGAGAAA RAGEGLGLIQ EAASVPEPAV
210 220 230 240 250
PADLAEMARE PAEEAAEEKL SEEATEEPDA EEPATEEPTA QEATAPEEVT
260 270 280
KSQPEKWDEE AQDAAGEEEK EQEKEKDAEN KVKNSKGT
Length:288
Mass (Da):30,100
Last modified:February 15, 2005 - v1
Checksum:iAED9537B9C8EBF60
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti161 – 1611L → P in AAH29540. (PubMed:15489334)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL670379 Genomic DNA. Translation: CAI42057.1.
AL670379 Genomic DNA. Translation: CAI42058.1.
AL670379 Genomic DNA. Translation: CAI42059.1.
AL670379 Genomic DNA. Translation: CAI42060.1.
AL670379 Genomic DNA. Translation: CAI42061.1.
AL670379 Genomic DNA. Translation: CAI42062.1.
AL670379 Genomic DNA. Translation: CAI42063.1.
AL670379 Genomic DNA. Translation: CAI42064.1.
AL670379 Genomic DNA. Translation: CAI42065.1.
AL670379 Genomic DNA. Translation: CAI42066.1.
AL670379 Genomic DNA. Translation: CAI42067.1.
AC008162 Genomic DNA. No translation available.
BC029540 mRNA. Translation: AAH29540.1.
CCDSiCCDS35381.1.
CCDS35382.1.
CCDS35383.1.
CCDS35384.1.
CCDS35385.1.
CCDS35386.1.
CCDS35387.1.
CCDS35388.1.
CCDS35389.1.
CCDS35390.1.
CCDS35391.1.
CCDS56607.1.
RefSeqiNP_001073606.1. NM_001080137.1.
NP_001073607.1. NM_001080138.1.
NP_001073608.1. NM_001080139.1.
NP_001073609.1. NM_001080140.1.
NP_001073610.1. NM_001080141.1.
NP_001073611.1. NM_001080142.1.
NP_001073612.1. NM_001080143.1.
NP_001073613.1. NM_001080144.1.
NP_001073614.1. NM_001080145.1.
NP_001073615.1. NM_001080146.1.
NP_001229851.1. NM_001242922.1.
NP_775842.2. NM_173571.2.
UniGeneiHs.522775.
Hs.712504.
Hs.715076.
Hs.723061.
Hs.729566.

Genome annotation databases

EnsembliENST00000415858; ENSP00000389513; ENSG00000230594.
ENST00000416816; ENSP00000414509; ENSG00000226685.
ENST00000417256; ENSP00000408204; ENSG00000226600.
ENST00000419194; ENSP00000399711; ENSG00000226023.
ENST00000419982; ENSP00000391318; ENSG00000226685.
ENST00000430448; ENSP00000411909; ENSG00000224089.
ENST00000433030; ENSP00000393315; ENSG00000236371.
ENST00000434883; ENSP00000392283; ENSG00000228517.
ENST00000439466; ENSP00000390070; ENSG00000237957.
ENST00000441330; ENSP00000398559; ENSG00000236126.
ENST00000443600; ENSP00000415974; ENSG00000226023.
ENST00000457020; ENSP00000410400; ENSG00000226929.
ENST00000457977; ENSP00000400046; ENSG00000230347.
ENST00000458218; ENSP00000414253; ENSG00000242362.
ENST00000618867; ENSP00000478317; ENSG00000226023.
GeneIDi100507170.
255313.
653282.
728036.
728042.
728049.
728062.
728072.
728075.
728082.
728090.
728096.
KEGGihsa:100507170.
hsa:255313.
hsa:653282.
hsa:728036.
hsa:728042.
hsa:728049.
hsa:728062.
hsa:728072.
hsa:728075.
hsa:728082.
hsa:728090.
hsa:728096.
UCSCiuc004eta.3. human.

Polymorphism databases

DMDMi74741726.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL670379 Genomic DNA. Translation: CAI42057.1 .
AL670379 Genomic DNA. Translation: CAI42058.1 .
AL670379 Genomic DNA. Translation: CAI42059.1 .
AL670379 Genomic DNA. Translation: CAI42060.1 .
AL670379 Genomic DNA. Translation: CAI42061.1 .
AL670379 Genomic DNA. Translation: CAI42062.1 .
AL670379 Genomic DNA. Translation: CAI42063.1 .
AL670379 Genomic DNA. Translation: CAI42064.1 .
AL670379 Genomic DNA. Translation: CAI42065.1 .
AL670379 Genomic DNA. Translation: CAI42066.1 .
AL670379 Genomic DNA. Translation: CAI42067.1 .
AC008162 Genomic DNA. No translation available.
BC029540 mRNA. Translation: AAH29540.1 .
CCDSi CCDS35381.1.
CCDS35382.1.
CCDS35383.1.
CCDS35384.1.
CCDS35385.1.
CCDS35386.1.
CCDS35387.1.
CCDS35388.1.
CCDS35389.1.
CCDS35390.1.
CCDS35391.1.
CCDS56607.1.
RefSeqi NP_001073606.1. NM_001080137.1.
NP_001073607.1. NM_001080138.1.
NP_001073608.1. NM_001080139.1.
NP_001073609.1. NM_001080140.1.
NP_001073610.1. NM_001080141.1.
NP_001073611.1. NM_001080142.1.
NP_001073612.1. NM_001080143.1.
NP_001073613.1. NM_001080144.1.
NP_001073614.1. NM_001080145.1.
NP_001073615.1. NM_001080146.1.
NP_001229851.1. NM_001242922.1.
NP_775842.2. NM_173571.2.
UniGenei Hs.522775.
Hs.712504.
Hs.715076.
Hs.723061.
Hs.729566.

3D structure databases

ProteinModelPortali Q5JQC4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9606.ENSP00000360328.

PTM databases

PhosphoSitei Q5JQC4.

Polymorphism databases

DMDMi 74741726.

Proteomic databases

MaxQBi Q5JQC4.
PaxDbi Q5JQC4.
PeptideAtlasi Q5JQC4.
PRIDEi Q5JQC4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000415858 ; ENSP00000389513 ; ENSG00000230594 .
ENST00000416816 ; ENSP00000414509 ; ENSG00000226685 .
ENST00000417256 ; ENSP00000408204 ; ENSG00000226600 .
ENST00000419194 ; ENSP00000399711 ; ENSG00000226023 .
ENST00000419982 ; ENSP00000391318 ; ENSG00000226685 .
ENST00000430448 ; ENSP00000411909 ; ENSG00000224089 .
ENST00000433030 ; ENSP00000393315 ; ENSG00000236371 .
ENST00000434883 ; ENSP00000392283 ; ENSG00000228517 .
ENST00000439466 ; ENSP00000390070 ; ENSG00000237957 .
ENST00000441330 ; ENSP00000398559 ; ENSG00000236126 .
ENST00000443600 ; ENSP00000415974 ; ENSG00000226023 .
ENST00000457020 ; ENSP00000410400 ; ENSG00000226929 .
ENST00000457977 ; ENSP00000400046 ; ENSG00000230347 .
ENST00000458218 ; ENSP00000414253 ; ENSG00000242362 .
ENST00000618867 ; ENSP00000478317 ; ENSG00000226023 .
GeneIDi 100507170.
255313.
653282.
728036.
728042.
728049.
728062.
728072.
728075.
728082.
728090.
728096.
KEGGi hsa:100507170.
hsa:255313.
hsa:653282.
hsa:728036.
hsa:728042.
hsa:728049.
hsa:728062.
hsa:728072.
hsa:728075.
hsa:728082.
hsa:728090.
hsa:728096.
UCSCi uc004eta.3. human.

Organism-specific databases

CTDi 100507170.
255313.
653282.
728036.
728042.
728049.
728062.
728072.
728075.
728082.
728090.
728096.
GeneCardsi GC0XM120012.
GC0XM120067.
GC0XM120072.
GC0XM120077.
GC0XM120082.
GC0XM120087.
GC0XM120092.
GC0XM120093.
GC0XM120101.
GC0XM120106.
GC0XM120111.
GC0XM120112.
HGNCi HGNC:33282. CT47A1.
HGNC:33291. CT47A10.
HGNC:27397. CT47A11.
HGNC:33292. CT47A12.
HGNC:33283. CT47A2.
HGNC:33284. CT47A3.
HGNC:33285. CT47A4.
HGNC:33286. CT47A5.
HGNC:33287. CT47A6.
HGNC:33288. CT47A7.
HGNC:33289. CT47A8.
HGNC:33290. CT47A9.
HPAi HPA042483.
MIMi 300592. gene.
300780. gene.
300781. gene.
300782. gene.
300783. gene.
300784. gene.
300785. gene.
300786. gene.
300787. gene.
300788. gene.
300789. gene.
neXtProti NX_Q5JQC4.
PharmGKBi PA164718206.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG130989.
GeneTreei ENSGT00390000002253.
HOGENOMi HOG000112037.
HOVERGENi HBG094803.
InParanoidi Q5JQC4.
OMAi RLSHNDH.
OrthoDBi EOG71CFNT.
PhylomeDBi Q5JQC4.
TreeFami TF342556.

Miscellaneous databases

NextBioi 92541.
SOURCEi Search...

Gene expression databases

Bgeei Q5JQC4.
Genevestigatori Q5JQC4.

Family and domain databases

InterProi IPR028930. CT47.
[Graphical view ]
PANTHERi PTHR32157. PTHR32157. 1 hit.
Pfami PF15623. CT47. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence of the human X chromosome."
    Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C.
    , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
    Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  3. "Identification of a new cancer/testis gene family, CT47, among expressed multicopy genes on the human X chromosome."
    Chen Y.-T., Iseli C., Venditti C.A., Old L.J., Simpson A.J.G., Jongeneel C.V.
    Genes Chromosomes Cancer 45:392-400(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION, TISSUE SPECIFICITY.

Entry informationi

Entry nameiCT47A_HUMAN
AccessioniPrimary (citable) accession number: Q5JQC4
Secondary accession number(s): Q8N747
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: February 15, 2005
Last modified: October 29, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

External Data

Dasty 3