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Q5JM82

- MT2B_ORYSJ

UniProt

Q5JM82 - MT2B_ORYSJ

Protein

Metallothionein-like protein 2B

Gene

MT2B

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    Metallothioneins have a high content of cysteine residues that bind various heavy metals.

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW

    Keywords - Ligandi

    Metal-binding, Metal-thiolate cluster

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Metallothionein-like protein 2B
    Alternative name(s):
    Class I metallothionein-like protein 2B
    OsMT-I-2b
    OsMT2c
    Gene namesi
    Name:MT2B
    Synonyms:RICMT
    Ordered Locus Names:Os01g0974200, LOC_Os01g74300
    ORF Names:P0698H10.31-1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiQ5JM82.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8080Metallothionein-like protein 2BPRO_0000263056Add
    BLAST

    Expressioni

    Tissue specificityi

    Highly expressed in stems. Expressed in leaves and rachis.2 Publications

    Inductioni

    By heavy metals.1 Publication

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os01g74300.1.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    OMAiCKYSEVE.

    Family and domain databases

    InterProiIPR000347. Metalthion_15p.
    [Graphical view]
    PfamiPF01439. Metallothio_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5JM82-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSCCGGNCGC GSSCQCGNGC GGCKYSEVEP TTTTTFLADA TNKGSGAASG   50
    GSEMGAENGS CGCNTCKCGT SCGCSCCNCN 80
    Length:80
    Mass (Da):7,601
    Last modified:February 15, 2005 - v1
    Checksum:iC4C9FBD71B9F8AAA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB002820 mRNA. Translation: BAA19661.1.
    AB041032 Genomic DNA. Translation: BAB40583.1.
    AP003298 Genomic DNA. Translation: BAD87425.1.
    AP003627 Genomic DNA. Translation: BAD87835.1.
    AP008207 Genomic DNA. Translation: BAF07466.1.
    PIRiT03404.
    RefSeqiNP_001045552.1. NM_001052087.1.
    UniGeneiOs.20391.

    Genome annotation databases

    EnsemblPlantsiOS01T0974200-01; OS01T0974200-01; OS01G0974200.
    OS01T0974200-02; OS01T0974200-02; OS01G0974200.
    GeneIDi4326409.
    KEGGiosa:4326409.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB002820 mRNA. Translation: BAA19661.1 .
    AB041032 Genomic DNA. Translation: BAB40583.1 .
    AP003298 Genomic DNA. Translation: BAD87425.1 .
    AP003627 Genomic DNA. Translation: BAD87835.1 .
    AP008207 Genomic DNA. Translation: BAF07466.1 .
    PIRi T03404.
    RefSeqi NP_001045552.1. NM_001052087.1.
    UniGenei Os.20391.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os01g74300.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS01T0974200-01 ; OS01T0974200-01 ; OS01G0974200 .
    OS01T0974200-02 ; OS01T0974200-02 ; OS01G0974200 .
    GeneIDi 4326409.
    KEGGi osa:4326409.

    Organism-specific databases

    Gramenei Q5JM82.

    Phylogenomic databases

    OMAi CKYSEVE.

    Family and domain databases

    InterProi IPR000347. Metalthion_15p.
    [Graphical view ]
    Pfami PF01439. Metallothio_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A novel MT gene of rice plants is strongly expressed in the node portion of the stem."
      Yu L.H., Umeda M., Liu J.-Y., Zhao N.M., Uchimiya H.
      Gene 206:29-35(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, INDUCTION.
    2. "Genomic sequence of the rice metallothionein."
      Uchimiya H.
      Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    3. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    5. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    6. "Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
      Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
      J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiMT2B_ORYSJ
    AccessioniPrimary (citable) accession number: Q5JM82
    Secondary accession number(s): O04107
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: February 15, 2005
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Metallothioneins
      Classification of metallothioneins and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3