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Q5JM82

- MT2B_ORYSJ

UniProt

Q5JM82 - MT2B_ORYSJ

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Protein

Metallothionein-like protein 2B

Gene

MT2B

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Metal-thiolate cluster

Names & Taxonomyi

Protein namesi
Recommended name:
Metallothionein-like protein 2B
Alternative name(s):
Class I metallothionein-like protein 2B
OsMT-I-2b
OsMT2c
Gene namesi
Name:MT2B
Synonyms:RICMT
Ordered Locus Names:Os01g0974200, LOC_Os01g74300
ORF Names:P0698H10.31-1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 1

Organism-specific databases

GrameneiQ5JM82.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8080Metallothionein-like protein 2BPRO_0000263056Add
BLAST

Expressioni

Tissue specificityi

Highly expressed in stems. Expressed in leaves and rachis.2 Publications

Inductioni

By heavy metals.1 Publication

Gene expression databases

ExpressionAtlasiQ5JM82. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g74300.1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

OMAiCKYSEVE.

Family and domain databases

InterProiIPR000347. Metalthion_15p.
[Graphical view]
PfamiPF01439. Metallothio_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5JM82-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSCCGGNCGC GSSCQCGNGC GGCKYSEVEP TTTTTFLADA TNKGSGAASG
60 70 80
GSEMGAENGS CGCNTCKCGT SCGCSCCNCN
Length:80
Mass (Da):7,601
Last modified:February 15, 2005 - v1
Checksum:iC4C9FBD71B9F8AAA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB002820 mRNA. Translation: BAA19661.1.
AB041032 Genomic DNA. Translation: BAB40583.1.
AP003298 Genomic DNA. Translation: BAD87425.1.
AP003627 Genomic DNA. Translation: BAD87835.1.
AP008207 Genomic DNA. Translation: BAF07466.1.
PIRiT03404.
RefSeqiNP_001045552.1. NM_001052087.1.
UniGeneiOs.20391.

Genome annotation databases

EnsemblPlantsiOS01T0974200-01; OS01T0974200-01; OS01G0974200.
OS01T0974200-02; OS01T0974200-02; OS01G0974200.
GeneIDi4326409.
KEGGiosa:4326409.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB002820 mRNA. Translation: BAA19661.1 .
AB041032 Genomic DNA. Translation: BAB40583.1 .
AP003298 Genomic DNA. Translation: BAD87425.1 .
AP003627 Genomic DNA. Translation: BAD87835.1 .
AP008207 Genomic DNA. Translation: BAF07466.1 .
PIRi T03404.
RefSeqi NP_001045552.1. NM_001052087.1.
UniGenei Os.20391.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os01g74300.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS01T0974200-01 ; OS01T0974200-01 ; OS01G0974200 .
OS01T0974200-02 ; OS01T0974200-02 ; OS01G0974200 .
GeneIDi 4326409.
KEGGi osa:4326409.

Organism-specific databases

Gramenei Q5JM82.

Phylogenomic databases

OMAi CKYSEVE.

Gene expression databases

ExpressionAtlasi Q5JM82. baseline.

Family and domain databases

InterProi IPR000347. Metalthion_15p.
[Graphical view ]
Pfami PF01439. Metallothio_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A novel MT gene of rice plants is strongly expressed in the node portion of the stem."
    Yu L.H., Umeda M., Liu J.-Y., Zhao N.M., Uchimiya H.
    Gene 206:29-35(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, INDUCTION.
  2. "Genomic sequence of the rice metallothionein."
    Uchimiya H.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. "The genome sequence and structure of rice chromosome 1."
    Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
    , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
    Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  6. "Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
    Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
    J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, TISSUE SPECIFICITY.

Entry informationi

Entry nameiMT2B_ORYSJ
AccessioniPrimary (citable) accession number: Q5JM82
Secondary accession number(s): O04107
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: February 15, 2005
Last modified: October 29, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Metallothioneins
    Classification of metallothioneins and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3