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Protein

Probable protein phosphatase 2C 5

Gene

Os01g0552300

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi92Manganese 1By similarity1
Metal bindingi92Manganese 2By similarity1
Metal bindingi93Manganese 1; via carbonyl oxygenBy similarity1
Metal bindingi295Manganese 2By similarity1
Metal bindingi338Manganese 2By similarity1

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase, Protein phosphatase
LigandMagnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 5 (EC:3.1.3.16)
Short name:
OsPP2C05
Gene namesi
Ordered Locus Names:Os01g0552300, LOC_Os01g37130
ORF Names:OSJNBa0066C06.19
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei366 – 388HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003632511 – 389Probable protein phosphatase 2C 5Add BLAST389

Proteomic databases

PaxDbiQ5JKN1

Expressioni

Gene expression databases

ExpressionAtlasiQ5JKN1 differential
GenevisibleiQ5JKN1 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g37130.1

Structurei

3D structure databases

ProteinModelPortaliQ5JKN1
SMRiQ5JKN1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini57 – 347PPM-type phosphatasePROSITE-ProRule annotationAdd BLAST291

Sequence similaritiesi

Belongs to the PP2C family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0698 Eukaryota
COG0631 LUCA
HOGENOMiHOG000029436
InParanoidiQ5JKN1
KOiK04457
OMAiFDGHAGF
OrthoDBiEOG09360DLF

Family and domain databases

CDDicd00143 PP2Cc, 1 hit
Gene3Di3.60.40.10, 1 hit
InterProiView protein in InterPro
IPR015655 PP2C
IPR000222 PP2C_BS
IPR036457 PPM-type_dom_sf
IPR001932 PPM-type_phosphatase_dom
PANTHERiPTHR13832 PTHR13832, 1 hit
PfamiView protein in Pfam
PF00481 PP2C, 1 hit
SMARTiView protein in SMART
SM00332 PP2Cc, 1 hit
SUPFAMiSSF81606 SSF81606, 1 hit
PROSITEiView protein in PROSITE
PS01032 PPM_1, 1 hit
PS51746 PPM_2, 1 hit

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q5JKN1-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MALLSPRVPR LPLASASAAG AGLRCCVSGG RAGSAAWCHA SAAGSVASSS
60 70 80 90 100
SELEAIRWGT AKLQGARDEM EDEVVLRPGS LLDGFSFAAV FDGHAGFSAV
110 120 130 140 150
EFLRDELYKE CAAALDGGAV LSTKNLDAIT DSIQRAFATV DANLSTWLEQ
160 170 180 190 200
MDKEDESGAT ATAMFLRNDV LVVSHIGDSC LQVVSRGGRP QAVTNFHRPY
210 220 230 240 250
GNKKASLEEV KRIRAAGGWI VDGRICGEIS VSRAFGDIRF KTRKNEMLVK
260 270 280 290 300
GVKEGRWTEK FISRINFKGD LIVSSPDVSL VELGPDVEFV LLATDGLWDY
310 320 330 340 350
IKSSEAVALV RDQLRQHGDV QVACEALGQI ALDRRSQDNI SIVIADLGRT
360 370 380
NWKELPAQRP NLFLELTQAV ATVGAVSLGI YISSLLALQ
Length:389
Mass (Da):41,738
Last modified:February 15, 2005 - v1
Checksum:iA22EF6515BCF0C01
GO
Isoform 2 (identifier: Q5JKN1-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     182-182: Missing.

Note: Derived from EST data. May be due to a competing acceptor splice site. No experimental confirmation available.
Show »
Length:388
Mass (Da):41,610
Checksum:i407CB5417AC44BEF
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti44G → S in AK106278 (PubMed:12869764).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_036258182Missing in isoform 2. Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003933 Genomic DNA Translation: BAD87977.1
AP008207 Genomic DNA Translation: BAF05225.1
AP014957 Genomic DNA Translation: BAS72660.1
AK106278 mRNA No translation available.
RefSeqiXP_015611411.1, XM_015755925.1 [Q5JKN1-1]
XP_015611470.1, XM_015755984.1 [Q5JKN1-1]
XP_015611533.1, XM_015756047.1 [Q5JKN1-2]
UniGeneiOs.15194

Genome annotation databases

EnsemblPlantsiOs01t0552300-01; Os01t0552300-01; Os01g0552300 [Q5JKN1-1]
GeneIDi4325851
GrameneiOs01t0552300-01; Os01t0552300-01; Os01g0552300 [Q5JKN1-1]
KEGGiosa:4325851

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiP2C05_ORYSJ
AccessioniPrimary (citable) accession number: Q5JKN1
Secondary accession number(s): A0A0P0V3X7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 15, 2005
Last modified: May 23, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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