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Q5JJV0

- INV4_ORYSJ

UniProt

Q5JJV0 - INV4_ORYSJ

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Protein
Beta-fructofuranosidase, insoluble isoenzyme 4
Gene
CIN4, Os01g0966700, LOC_Os01g73580, P0458E05.32
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at transcript leveli

Functioni

May play a role in sucrose partitioning during seed development and in stress response.

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei74 – 741 By similarity
Binding sitei90 – 901Substrate By similarity
Binding sitei98 – 981Substrate By similarity
Binding sitei253 – 2531Substrate By similarity
Binding sitei287 – 2871Substrate By similarity

GO - Molecular functioni

  1. sucrose alpha-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH32. Glycoside Hydrolase Family 32.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-fructofuranosidase, insoluble isoenzyme 4 (EC:3.2.1.26)
Alternative name(s):
Cell wall beta-fructosidase 4
Invertase 4
OsCIN4
Sucrose hydrolase 4
Gene namesi
Name:CIN4
Ordered Locus Names:Os01g0966700, LOC_Os01g73580
ORF Names:P0458E05.32
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 1

Organism-specific databases

GrameneiQ5JJV0.

Subcellular locationi

Secretedextracellular spaceapoplast Inferred. Secretedcell wall Inferred
Note: Associated to the cell wall Inferred.

GO - Cellular componenti

  1. apoplast Source: UniProtKB-SubCell
  2. cell wall Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Cell wall, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828 Reviewed prediction
Add
BLAST
Chaini29 – 590562Beta-fructofuranosidase, insoluble isoenzyme 4
PRO_0000033382Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi94 – 941N-linked (GlcNAc...) Reviewed prediction
Glycosylationi167 – 1671N-linked (GlcNAc...) Reviewed prediction
Glycosylationi247 – 2471N-linked (GlcNAc...) Reviewed prediction
Glycosylationi345 – 3451N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi445 ↔ 491 By similarity
Glycosylationi565 – 5651N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiQ5JJV0.

Expressioni

Tissue specificityi

Expressed in leaves. Expressed at moderate levels in roots and flowers, and weakly in seeds.1 Publication

Developmental stagei

Expressed from 1 to 10 days after flowering.2 Publications

Inductioni

By rice blast fungus (M.grisea) 12 hours after infection.1 Publication

Structurei

3D structure databases

ProteinModelPortaliQ5JJV0.
SMRiQ5JJV0. Positions 57-586.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni71 – 744Substrate binding By similarity
Regioni133 – 1342Substrate binding By similarity
Regioni198 – 1992Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG1621.
HOGENOMiHOG000181427.
KOiK01193.
OMAiWTNETDS.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
2.60.120.560. 2 hits.
InterProiIPR008985. ConA-like_lec_gl_sf.
IPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PfamiPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTiSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF75005. SSF75005. 1 hit.
PROSITEiPS00609. GLYCOSYL_HYDROL_F32. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5JJV0-1 [UniParc]FASTAAdd to Basket

« Hide

MVMAPIPQPW HQWPFLILFF LVLFSCESNL PCRNGVEATQ RVFLYPQSPK    50
VSSIVSKGYR TGYHFQPPKN WINDPNGPMY YNGIYHEFYQ YNPNGSVWGN 100
IVWGHSVSTD LINWIRLEPA IEGNTPSDIN GCWTGSATIL TGDQPVIIYT 150
GADTEKRQVQ NIVLPKNRSD PYLREWTKPK NNPLIEPVGP GLNSNQFRDP 200
TTGWIGPDGL WRIAVGAELN GYSAALLYKS KDFMQWTRVD HPLYSSNASN 250
MWECPDFFAV LPGKNNGLDL SAAIPNGAKH VLKMSLDSCD KYMIGVYDLK 300
HDMFVPDTVL DDRRLWLRID YGNYYASKSF FDSKKGRRII WGWTNETDST 350
SDDVAKGWAG IHAIPRTIWL DGDGKRLLQW PIEEVESLRR NEVSHQGLEL 400
KKGDLFEIKG TDTLQADVEI DFELTSIDAA DPFDPSWLLD TEKHCREADA 450
SVHGGLGPFG LVVLASDNMD EHTTVHFRVY KSEQKYMVLL CSDLRRSSLR 500
PGLYTPAYGG FFEYDLEKEK KISLRTLIDR SAVESFGGGG RACIMARVYP 550
AAVVDGATHM YAFNNGSSTV KVSQLKAWSM TRAQVNVRKG 590
Length:590
Mass (Da):66,610
Last modified:February 15, 2005 - v1
Checksum:i4999F60849A679E4
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti226 – 2261L → P in BAD05180. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY578161 mRNA. Translation: AAT84404.1.
AB154521 mRNA. Translation: BAD05180.1.
AP004365 Genomic DNA. Translation: BAD88258.1.
RefSeqiNP_001045504.1. NM_001052039.1.
UniGeneiOs.11387.

Genome annotation databases

EnsemblPlantsiOS01T0966700-01; OS01T0966700-01; OS01G0966700.
GeneIDi4324001.
KEGGiosa:4324001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY578161 mRNA. Translation: AAT84404.1 .
AB154521 mRNA. Translation: BAD05180.1 .
AP004365 Genomic DNA. Translation: BAD88258.1 .
RefSeqi NP_001045504.1. NM_001052039.1.
UniGenei Os.11387.

3D structure databases

ProteinModelPortali Q5JJV0.
SMRi Q5JJV0. Positions 57-586.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH32. Glycoside Hydrolase Family 32.

Proteomic databases

PRIDEi Q5JJV0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS01T0966700-01 ; OS01T0966700-01 ; OS01G0966700 .
GeneIDi 4324001.
KEGGi osa:4324001.

Organism-specific databases

Gramenei Q5JJV0.

Phylogenomic databases

eggNOGi COG1621.
HOGENOMi HOG000181427.
KOi K01193.
OMAi WTNETDS.

Family and domain databases

Gene3Di 2.115.10.20. 1 hit.
2.60.120.560. 2 hits.
InterProi IPR008985. ConA-like_lec_gl_sf.
IPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view ]
Pfami PF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view ]
SMARTi SM00640. Glyco_32. 1 hit.
[Graphical view ]
SUPFAMi SSF49899. SSF49899. 2 hits.
SSF75005. SSF75005. 1 hit.
PROSITEi PS00609. GLYCOSYL_HYDROL_F32. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and expression analysis of the cell-wall invertase gene family in rice (Oryza sativa L.)."
    Cho J.-I., Lee S.-K., Ko S., Kim H.-K., Jun S.-H., Lee Y.-H., Bhoo S.H., Lee K.-W., An G., Hahn T.-R., Jeon J.-S.
    Plant Cell Rep. 24:225-236(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, INDUCTION.
    Strain: cv. Nipponbare.
  2. Hirose T., Terao T.
    Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Nipponbare.
    Tissue: Panicle.
  3. "The genome sequence and structure of rice chromosome 1."
    Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
    , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
    Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): comparison of caryopses located at different positions in a panicle."
    Ishimaru T., Hirose T., Matsuda T., Goto A., Takahashi K., Sasaki H., Terao T., Ishii R., Ohsugi R., Yamagishi T.
    Plant Cell Physiol. 46:620-628(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: DEVELOPMENTAL STAGE.

Entry informationi

Entry nameiINV4_ORYSJ
AccessioniPrimary (citable) accession number: Q5JJV0
Secondary accession number(s): Q75SP0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: February 15, 2005
Last modified: May 14, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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