Q5JJ59 (Q5JJ59_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cyclomaltodextrinase EMBL BAD85959.1

Gene names

Ordered Locus Names:

TK1770

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	656 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JJ59 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 1B2C68C693A0E421	FASTA	656	76,349
	10 20 30 40 50 60 MYKVFGFEEN FIHGRVARVE FSLPDAGRWD YAYLLGNFNA FNEGSFRMKH EDKRWIIEIK 70 80 90 100 110 120 LPEGLWRYAF SAGGEFLLDP ENPEKELYRR PSYKFEREVS LAKIAGNDMV FHRPALLYLY 130 140 150 160 170 180 SFGDRTHVLL RSKKGKVDAA YLVTDDTHVK MRKKADGEVF EYYEAVLQET EKLRYSFEVF 190 200 210 220 230 240 LKEGKSLTLG PFEAAPFRLD APSWILDRVF YQIMPDRFAK GRDHEPPFLS WEYYGGDLWG 250 260 270 280 290 300 IVEKIDHLEE LGVNALYLTP IFESMTYHGY DITDYLRVAE RLGGEEAFRE LVKALKSRDI 310 320 330 340 350 360 KLVLDGVFHH TSFFHPFFRD VVERGEESEY ADFYRVKGFP VVSEEFIRVL KSDLPPMEKY 370 380 390 400 410 420 QTLKKMGWNY ESFFSVWVMP RLNHDSPKVR EFVARVMNYW LEKGADGWRL DVAHGVPPGF 430 440 450 460 470 480 WREVREGLPD DAYLFGEVMD DPRLYLFGVF HGVMNYPLYD LLLRFFAFGE IGATEFINGI 490 500 510 520 530 540 ELLSAHLGPA EYFTYNFLDN HDTERFIDLA GKERYLCALT FLMTYKGIPA IFYGDEIGLR 550 560 570 580 590 600 GSGEGMSAGR TPMSWDEEKW DFQILRQTMK LIELRRSLKS LQVGSFRVIG AGEKWFVYER 610 620 630 640 650 KAGSERVLVG INCSWNDVET PVPSNGSNEQ IKIPAFSSII RVKDSMNVHI GSDLQE

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD85959.1.
RefSeq	YP_184183.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JJ59.
ModBase	Search...
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000007745; EBPYRP00000007526; EBPYRG00000007744.
GeneID	3234467.
GenomeReviews	Gene locus TK1770 in contig AP006878_GR.
KEGG	tko:TK1770.
NMPDR	fig|69014.3.peg.1620.
Phylogenomic databases
eggNOG	arNOG04723.
GeneTree	EBGT00050000023437.
HOGENOM	HBG647285.
OMA	RVFYQIM.
PhylomeDB	Q5JJ59.
ProtClustDB	CLSK568344.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1770-MONOMER.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5JJ59_PYRKO

Accession

Primary (citable) accession number: Q5JJ59

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	October 19, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)