Q5JJ55 (Q5JJ55_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Amylopullulanase, GH57 family EMBL BAD85963.1

Gene names

Ordered Locus Names:

TK1774

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	1100 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JJ55 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: A1ABDA2A9EBC4EB4	FASTA	1,100	125,409
	10 20 30 40 50 60 MKKLVSLFLT ILVLGSIIGA NAKFALAEEP KPLNVIIVWH QHQPYYYDPI QDVYTRPWVR 70 80 90 100 110 120 LHAANNYWKM AHYLSEYPDV HVAIDLSGSL IAQLADYMNG KKDTHQIITE KIANGEPLTV 130 140 150 160 170 180 EDKWFMLQAP GGFFDHTIPW NGEPVTDQNG NPIRDFWDRY TELKNKMMNA KAKYANLPLE 190 200 210 220 230 240 EQKVAVTNEF TEQDYIDLAV LFNLAWIDYD YIMNTPELKA LYEKVDEGGY TRDDVKTVLN 250 260 270 280 290 300 AQLWLLNHTF EEHEKINYLL GNGNVEVTVV PYAHPIGPIL NDFGWESDFD AHVKKSHELY 310 320 330 340 350 360 KKYLGDGRVT PQGGWAAESA LNDKTLEILA ENGWQWVMTD QLVLDRLGVE KTIENYHKPW 370 380 390 400 410 420 VAEFNGKKIY LFPRDHALSD RVGFTYSGMN QYQAVQDFVN ELLKLQKQNY DGSLVYVVTL 430 440 450 460 470 480 DGENPWEHYP YDGKLFLEEL YKKLTELQNA GLIKTLTPSE YIKLYGDKAK ELTPKMMERL 490 500 510 520 530 540 DFTTEDKVNA LLKAKSLGEL YDMVGVQEEM QWPESSWIDG TLSTWIGEPQ ENYGWYWLYQ 550 560 570 580 590 600 ARKALMENKD KMSQDAWNKA YEYLLRAEAS DWFWWYGNDQ DSGQDYTFDR YLKTYLYEIY 610 620 630 640 650 660 KLAGVEPPSY LYGNYFPDGQ PYITRALDGL GEGDKKEYSS ESALAKGVEV YFEGDGIHFL 670 680 690 700 710 720 VKGDLNEFEV SLSSPDERIG NTFTILQKRP TELRYSLFPL SKDSVGMLIT THVVYKDGKA 730 740 750 760 770 780 EVYKAKDYET SEKVGDVTAK KTDAGVEVVV PFDYLSNPSD FYFAVSTVNE NGELEVISSP 790 800 810 820 830 840 VELKLPVQVK GAVIADIADP EGDDHGPGTY TYPTDSVFKP GVFDLLRFRM LEQADSYVME 850 860 870 880 890 900 FYFKDLGGNP WNGPNGFSLQ IIEVYLDFKE GGNSSAIKMF PDGPGSNVNL DPFHPWDVAL 910 920 930 940 950 960 RIAGWDYGNL IVLPNGTAIQ GEMQISADPT KNSIVVKLPK KYFPGVSDYG LYASVLVGSQ 970 980 990 1000 1010 1020 DGYGPDKWRP VAVEAEQWKG GGADPQAVIA GVAPRVYDML VPEGFKPTQE EQLKSYDTEN 1030 1040 1050 1060 1070 1080 GKLATVVMIP LVEGTGGEKP TETETPTKTT TTTTSSTETT TTSTTETATN HHDYYNHIPR 1090 1100 RRRKWQRIHH YQHLPRHRRW

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD85963.1.
RefSeq	YP_184187.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JJ55.
ModBase	Search...
Protein family/group databases
CAZy	GH57. Glycoside Hydrolase Family 57.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000007842; EBPYRP00000007623; EBPYRG00000007841.
GeneID	3234471.
GenomeReviews	Gene locus TK1774 in contig AP006878_GR.
KEGG	tko:TK1774.
NMPDR	fig|69014.3.peg.1623.
Phylogenomic databases
eggNOG	arNOG04719.
GeneTree	EBGT00050000022374.
HOGENOM	HBG726833.
OMA	QDGYGPD.
ProtClustDB	CLSK253238.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1774-MONOMER.
Family and domain databases
InterPro	IPR008960. Carb-bd_dom_fam9-like. IPR015922. Carb-bd_dom_fam9-like_subgr. IPR019248. DUF2223. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR004300. Glyco_hydro_57_N. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit.
Pfam	PF09985. DUF2223. 1 hit. PF03065. Glyco_hydro_57. 1 hit. [Graphical view]
SUPFAM	SSF49344. CBD9-like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5JJ55_PYRKO

Accession

Primary (citable) accession number: Q5JJ55

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	October 19, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)