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Protein
Submitted name:

Hydrogenase expression/formation protein HypC

Gene

Tk-hypC

Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Hydrogenase expression/formation protein HypCImported
Gene namesi
Name:Tk-hypCImported
Ordered Locus Names:TK2001Imported
OrganismiThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))Imported
Taxonomic identifieri69014 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000000536 Componenti: Chromosome

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
Tk-hypDQ5JII17EBI-16020957,EBI-16020973

Protein-protein interaction databases

DIPiDIP-59989N.
IntActiQ5JII0. 2 interactors.
STRINGi69014.TK2001.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2Z1CX-ray1.80A/B/C1-75[»]
3VYRX-ray2.55A2-75[»]
3VYSX-ray2.35A2-75[»]
3VYTX-ray2.25A2-75[»]
3VYUX-ray2.75A2-75[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiarCOG04427. Archaea.
COG0298. LUCA.
HOGENOMiHOG000278755.
KOiK04653.
OMAiYVIVHTG.
OrthoDBiPOG093Z0KDL.

Family and domain databases

InterProiView protein in InterPro
IPR019812. Hydgase_assmbl_chp_CS.
IPR001109. Hydrogenase_HupF/HypC.
PANTHERiPTHR35177. PTHR35177. 1 hit.
PfamiView protein in Pfam
PF01455. HupF_HypC. 1 hit.
PRINTSiPR00445. HUPFHYPC.
TIGRFAMsiTIGR00074. hypC_hupF. 1 hit.
PROSITEiView protein in PROSITE
PS01097. HUPF_HYPC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5JII0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCLAVPGKVI EVNGPVAVVD FGGVKREVRL DLMPDTKPGD WVIVHTGFAI
60 70
EKLDEKKAME ILEAWAEVEK AMEGF
Length:75
Mass (Da):8,255
Last modified:February 15, 2005 - v1
Checksum:iDEC8833D39C6DF70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA. Translation: BAD86190.1.
AB185891 Genomic DNA. Translation: BAD89077.1.
RefSeqiWP_011250951.1. NC_006624.1.

Genome annotation databases

EnsemblBacteriaiBAD86190; BAD86190; TK2001.
GeneIDi3234801.
KEGGitko:TK2001.
PATRICifig|69014.16.peg.1954.

Similar proteinsi

Entry informationi

Entry nameiQ5JII0_THEKO
AccessioniPrimary (citable) accession number: Q5JII0
Secondary accession number(s): Q5H7P7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: October 25, 2017
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported