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Protein
Submitted name:

ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog

Gene

TK2007

Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei160 – 1601ADPCombined sources
Binding sitei187 – 1871ADPCombined sources
Binding sitei223 – 2231ADPCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi28 – 358ADPCombined sources
Nucleotide bindingi217 – 2193ADPCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciTKOD69014:GH72-2049-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homologImported
Gene namesi
Ordered Locus Names:TK2007Imported
OrganismiThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))Imported
Taxonomic identifieri69014 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
ProteomesiUP000000536 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi69014.TK2007.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VX3X-ray2.10A/B1-248[»]
ProteinModelPortaliQ5JIH4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0489.
HOGENOMiHOG000079916.
InParanoidiQ5JIH4.
KOiK03593.
OMAiIIENMKL.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR019591. Mrp/NBP35_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR23264. PTHR23264. 1 hit.
PfamiPF01656. CbiA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5JIH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAIDPREIA INARLEGVKR IIPVVSGKGG VGKSLVSTTL ALVLAEKGYR
60 70 80 90 100
VGLLDLDFHG ASDHVILGFE PKEFPEEDRG VVPPTVHGIK FMTIAYYTED
110 120 130 140 150
RPTPLRGKEI SDALIELLTI TRWDELDYLV IDMPPGLGDQ LLDVLRFLKR
160 170 180 190 200
GEFLVVATPS KLSLNVVRKL IELLKEEGHK VIGVVENMKL RSEQLDDEKD
210 220 230 240
VEKLAEEFGV PYLVGIPFYP DLDAKVGNVE ELMKTEFAGK VRELAGRL
Length:248
Mass (Da):27,586
Last modified:February 15, 2005 - v1
Checksum:iD0E5F945B639C2B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA. Translation: BAD86196.1.
RefSeqiWP_011250957.1. NC_006624.1.
YP_184420.1. NC_006624.1.

Genome annotation databases

EnsemblBacteriaiBAD86196; BAD86196; TK2007.
GeneIDi3234884.
KEGGitko:TK2007.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA. Translation: BAD86196.1.
RefSeqiWP_011250957.1. NC_006624.1.
YP_184420.1. NC_006624.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VX3X-ray2.10A/B1-248[»]
ProteinModelPortaliQ5JIH4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi69014.TK2007.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD86196; BAD86196; TK2007.
GeneIDi3234884.
KEGGitko:TK2007.

Phylogenomic databases

eggNOGiCOG0489.
HOGENOMiHOG000079916.
InParanoidiQ5JIH4.
KOiK03593.
OMAiIIENMKL.

Enzyme and pathway databases

BioCyciTKOD69014:GH72-2049-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR019591. Mrp/NBP35_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR23264. PTHR23264. 1 hit.
PfamiPF01656. CbiA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
    Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
    Genome Res. 15:352-363(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-918 / JCM 12380 / KOD1Imported.
  2. "Identification and structure of a novel archaeal HypB for [NiFe] hydrogenase maturation."
    Sasaki D., Watanabe S., Matsumi R., Shoji T., Yasukochi A., Tagashira K., Fukuda W., Kanai T., Atomi H., Imanaka T., Miki K.
    J. Mol. Biol. 425:1627-1640(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) IN COMPLEX WITH ADP.

Entry informationi

Entry nameiQ5JIH4_THEKO
AccessioniPrimary (citable) accession number: Q5JIH4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: June 24, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.