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Protein
Submitted name:

Pullulanase type II, GH13 family

Gene

TK0977

Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciTKOD69014:G1G2A-968-MONOMER

Protein family/group databases

CAZyiCBM48 Carbohydrate-Binding Module Family 48
GH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Pullulanase type II, GH13 familyImported
Gene namesi
Ordered Locus Names:TK0977Imported
OrganismiThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))Imported
Taxonomic identifieri69014 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000000536 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi69014.TK0977

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5OT1X-ray2.80A1-765[»]
ProteinModelPortaliQ5JID9
SMRiQ5JID9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini295 – 684AamyInterPro annotationAdd BLAST390

Phylogenomic databases

eggNOGiarCOG02948 Archaea
COG0366 LUCA
HOGENOMiHOG000085606
InParanoidiQ5JID9
KOiK01208
OMAiHQYFGGD
OrthoDBiPOG093Z00OV

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR032640 AMPK1_CBM
IPR006047 Glyco_hydro_13_cat_dom
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF16561 AMPK1_CBM, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 1 hit

Sequencei

Sequence statusi: Complete.

Q5JID9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKGGLLLIL LILVSIASGC ISESNENQTA TASTVPPTSV TPSQSSTPTT
60 70 80 90 100
STSTYGPSER TELKLPSVNY TPIYVGIEKG CPSGRVPVKF TYNPGNKTVK
110 120 130 140 150
SVSLRGSFNN WGEWPMELKN GTWETTVCLR PGRYEYKYFI NGQWVKDMSD
160 170 180 190 200
DGTGRPYDPD ADAYAPDGYG GKNAVRVVEG REAFYVEFDP RDPAYLSIAD
210 220 230 240 250
KRTVVRFEAK RDTVESAVLV TDHGNYTMKL QVWWDFGETW RAEMPVEPAD
260 270 280 290 300
YYILVTSSDG GKFAVLNTSE SPFFHFDGVE GFPQLEWVSN GITYQIFPDR
310 320 330 340 350
FNNGNKSNDA LALDHDELIL NQVNPGQPIL SNWSDPITPL HCCHQYFGGD
360 370 380 390 400
IKGITEKLDY LQSLGVTIIY INPIFLSGSA HGYDTYDYYR LDPKFGTEDE
410 420 430 440 450
LREFLDEAHR RGMRVIFDFV PNHCGIGNPA FLDVWEKGNE SPYWDWFFVK
460 470 480 490 500
KWPFKLGDGS AYVGWWGFGS LPKLNTANQE VREYLIGAAL HWIEFGFDGI
510 520 530 540 550
RVDVPNEVLD PGTFFPELRK AVKEKKPDAY LVGEIWTLSP EWVKGDRFDS
560 570 580 590 600
LMNYALGRDI LLNYAKGLLS GESAMKMMGR YYASYGENVV AMGFNLVDSH
610 620 630 640 650
DTSRVLTDLG GGKLGDTPSN ESIQRLKLLS TLLYALPGTP VTFQGDERGL
660 670 680 690 700
LGDKGHYDEQ RYPIQWDTVN EDVLNHYRAL AELRKRVPAL RSSAMRFYTA
710 720 730 740 750
KGGVMAFFRG HHDEVLVVAN SWKKPALLEL PEGEWKVIWP EDFSPELLRG
760
TVEVPAIGII ILERG
Length:765
Mass (Da):86,046
Last modified:February 15, 2005 - v1
Checksum:i9DDD82BD7BE3E3ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA Translation: BAD85166.1
RefSeqiWP_011249928.1, NC_006624.1

Genome annotation databases

EnsemblBacteriaiBAD85166; BAD85166; TK0977
GeneIDi3235344
KEGGitko:TK0977
PATRICifig|69014.16.peg.955

Similar proteinsi

Entry informationi

Entry nameiQ5JID9_THEKO
AccessioniPrimary (citable) accession number: Q5JID9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: June 20, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

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