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Q5JHH6 (Q5JHH6_PYRKO) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Methyl-accepting chemotaxis protein EMBL BAD86336.1
Gene names
Ordered Locus Names:TK2147
OrganismPyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1)) [Reference proteome] [HAMAP]
Taxonomic identifier69014 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus ›

Protein attributes

Sequence length769 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5JHH6 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: EE2BB5234D5FDEBD

FASTA76984,620
        10         20         30         40         50         60 
MQFRKKIAVI VIAAVLVTLL IGSATVGYAT LKMRDNIQKT LDVQLNEVLP KEMEKSVQEP 

        70         80         90        100        110        120 
ITEEAGTITV SAAELGARLF DDYFDKMRMM GDVAVQDVLE AYSKYDESDP QFKAFLLKRF 

       130        140        150        160        170        180 
EMVKNLDPNV AYVYFGSTTG GMYMWPDEPL PEGYDPRVRP WYKEAVDKNG PVWTEPYKDA 

       190        200        210        220        230        240 
STGKWIVTFS EPVYINGEFV GVIGVDVFVS TLIDQAKQIK IGQTGYIAIL NKDGTIIVHP 

       250        260        270        280        290        300 
DESLVQKLNI HDDPNLASLA GELDKNKETG WIRYTFKGVD KIGGYKRMKT TGWIVLATVP 

       310        320        330        340        350        360 
INELTDPMMN AIDSSLKANT EKVASEINSE VNSGIKTSLL GSVFAAVFGL IVLGIAYRTL 

       370        380        390        400        410        420 
NTTLKPLEQL RDVAQALADG RLSEVREKLR GIQYLEDDEI GALIKAFESV GKDLVGALDT 

       430        440        450        460        470        480 
IASKLERLAE GDLSNGLSVE AKGELREVLE DLRDTTHRLK GLIGEIVNVT NELDKRANVL 

       490        500        510        520        530        540 
AQVANDVTEA INQVNEAVQQ VSIEAQRQQE NINEITEGMR LVADMSEESV RAMEEFEGAV 

       550        560        570        580        590        600 
NEVVHIAEEG RQKGEVSAQQ IQSIQEMMGN IEAAVNRVNE MSRSIEEITN VITGIAEQTN 

       610        620        630        640        650        660 
LLALNAAIEA ARAGEAGRGF AVVAQEIRNL AEESKKAADN IKEIINRMTE EIRDAVNATQ 

       670        680        690        700        710        720 
RGVSVVSESS ETLRETTEYL TNIAELISDT GARLGHVKEQ ILRTQEEVDK ALKALENLAA 

       730        740        750        760 
SAEETTASAE EVSSAVEEQT AAIEELQRAA TDLKAIVEKL RDIIGKFKL

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References

[1]"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
Genome Res. 15:352-363(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-918 / JCM 12380 / KOD1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006878 Genomic DNA. Translation: BAD86336.1.
RefSeqYP_184560.1. NC_006624.1.

3D structure databases

ProteinModelPortalQ5JHH6.
ModBaseSearch...

Protein-protein interaction databases

STRING69014.TK2147.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD86336; BAD86336; TK2147.
GeneID3235462.
KEGGtko:TK2147.

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000078241.
KOK03406.
OMAWHAGSES.
ProtClustDBCLSK397787.

Enzyme and pathway databases

BioCycTKOD69014:GH72-2191-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5JHH6_PYRKO
AccessionPrimary (citable) accession number: Q5JHH6
Entry history
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: May 29, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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