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Q5JHC8 (Q5JHC8_PYRKO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TK0752
OrganismPyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))
Taxonomic identifier69014 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length632 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: InterPro

   Molecular functionserine-type peptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5JHC8 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: F75E4E8A237CD060

FASTA63272,086
        10         20         30         40         50         60 
MVKGLTEKDL GKFKLVGNID ALGRKLVFQV TEISVEKDDY FSRLYLYDGR RVEPFTSGKK 

        70         80         90        100        110        120 
DANPRFSPDG KLVAFTSKRD KESKEAELYV IPTDGGEARL LAKFKYGIKN LRFTEDGKGI 

       130        140        150        160        170        180 
AVVTPIDVEK KPKDDVHIIK ELPFWFNGVG WIYGKRSVVY LVDVESGKKK RLTPKNLDVG 

       190        200        210        220        230        240 
QIRFHNGKLY FTAQEDRERK PMVSDLYVLE GRKAKRLTPG KWSISDFIPL DDGTFILKAN 

       250        260        270        280        290        300 
TRERGIPTNT HIYHYNPETG EMRKLTKDLD RAAYNSLNSD VRGAQRAELV FRDGWVYYIA 

       310        320        330        340        350        360 
TDGPRANLFR VNLDGKIERV IGGDRSVESF AIGDYIAFTA QDAVTPLELY VLRDGKEKKV 

       370        380        390        400        410        420 
TDFNGWIKEY SLSKPEHFKV KASDGVEIDA WIMKPVNFEP GKKYPAVLEI HGGPKTAYGY 

       430        440        450        460        470        480 
AFMHEFHVLT AKGFAVIFSN PRGSDGYGEE FADIRGHYGE RDYQDIMEVV DEAVKRFDFI 

       490        500        510        520        530        540 
DPERIGVTGG SYGGFMTNWI VGHTNRFKAA VTQRSISNWT SFFGTTDIGY FFAPDQIGGD 

       550        560        570        580        590        600 
PWSNTEGYWE KSPLKYAPNV ETPLLIIHSM EDYRCWLPEA LQFFTALKYL GKTVELALFP 

       610        620        630 
GENHDLSRSG KPKHRVRRLE LIAGWMERWL NK 

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References

[1]"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006878 Genomic DNA. Translation: BAD84941.1.
RefSeqYP_183165.1. NC_006624.1.

3D structure databases

ProteinModelPortalQ5JHC8.
ModBaseSearch...

Protein family/group databases

MEROPSS09.071.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBPYRT00000006906; EBPYRP00000006687; EBPYRG00000006905.
GeneID3234797.
GenomeReviewsGene locus TK0752 in contig AP006878_GR.
KEGGtko:TK0752.
NMPDRfig|69014.3.peg.998.

Phylogenomic databases

eggNOGarNOG06346.
GeneTreeEBGT00050000022653.
HOGENOMHBG531533.
OMAGEEFADI.
PhylomeDBQ5JHC8.
ProtClustDBCLSK253308.

Enzyme and pathway databases

BioCycTKOD69014:TK0752-MONOMER.

Family and domain databases

InterProIPR011042. 6-blade_b-propeller_TolB-like.
IPR011659. PD40.
IPR001375. Peptidase_S9.
[Graphical view]
Gene3DG3DSA:2.120.10.30. 6-blade_b-propeller_TolB-like. 2 hits.
PfamPF07676. PD40. 1 hit.
PF00326. Peptidase_S9. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5JHC8_PYRKO
AccessionPrimary (citable) accession number: Q5JHC8
Entry history
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)