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Protein

UPF0201 protein TK1335

Gene

TK1335

Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciTKOD69014:GH72-1356-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0201 protein TK1335UniRule annotation
Gene namesi
Ordered Locus Names:TK1335
OrganismiThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Taxonomic identifieri69014 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000000536 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000945171 – 138UPF0201 protein TK1335Add BLAST138

Interactioni

Protein-protein interaction databases

STRINGi69014.TK1335.

Structurei

3D structure databases

ProteinModelPortaliQ5JGV3.
SMRiQ5JGV3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0201 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01043. Archaea.
COG1931. LUCA.
HOGENOMiHOG000224697.
InParanoidiQ5JGV3.
KOiK09736.
OMAiKWLAPRT.
OrthoDBiPOG093Z0FFL.

Family and domain databases

Gene3Di3.30.1440.10. 1 hit.
HAMAPiMF_01112. UPF0201. 1 hit.
InterProiView protein in InterPro
IPR022803. Ribosomal_L5_domain.
IPR002739. UPF0201.
PfamiView protein in Pfam
PF01877. RNA_binding. 1 hit.
SUPFAMiSSF55282. SSF55282. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5JGV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSELFEEVEV EAYVYPTEDI EKVKKAMLNL IPDLEFEAFD RGDYIILTAK
60 70 80 90 100
TRSRKALSRL YELFRGQAIL DTARSFLEEG YFGEEIIIKV NKQAAYAGVV
110 120 130
NFNEESPLGP ITIIIRTKDP QRLMKWLAPR TKDGVPIE
Length:138
Mass (Da):15,875
Last modified:February 15, 2005 - v1
Checksum:i6346CB52E78E308F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA. Translation: BAD85524.1.
RefSeqiWP_011250286.1. NC_006624.1.

Genome annotation databases

EnsemblBacteriaiBAD85524; BAD85524; TK1335.
GeneIDi3235747.
KEGGitko:TK1335.
PATRICifig|69014.16.peg.1307.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiY1335_THEKO
AccessioniPrimary (citable) accession number: Q5JGV3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: February 15, 2005
Last modified: June 7, 2017
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries