Q5JGG6 (Q5JGG6_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase, class III EMBL BAD85400.1

Gene names

Ordered Locus Names:

TK1211

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1)) [Reference proteome] [HAMAP]

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus › Thermococcus kodakarensis

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL BAD85400.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JGG6 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: C2FE1179B795EDA8	FASTA	443	48,981
	10 20 30 40 50 60 MTPEEVVERY SQVISRASHV TYVPIVPSRA ENALVWDIEG RAYIDFLADA AVQNVGHNNP 70 80 90 100 110 120 RVVEAVKKTA DRLLHFTFIY GFPVEPLLLA EKLREIAPLE GAKVAFGLSG SDANDGAIKF 130 140 150 160 170 180 ARAYTGRRSI IGYLRSYYGS TYGAMSVTGL DFEVRSKVGQ LSDVHFIPFP NCYRCPFGKE 190 200 210 220 230 240 PGKCRMECVS FLKEKFEGEV HAEGTAALIA EAIQGDAGMV VPPENYFKKL KRILDEHGIL 250 260 270 280 290 300 LVVDEVQSGL GRTGKWFAIE HFGVEPEIIT LAKPLGGGLP ISAIVGRGEI MDSLPPLGHA 310 320 330 340 350 360 FTMSGNPVAS AAALAVIEEI EEKELLKRAQ ILGERAKRRL EKMKKKHELI GDVRGLGLML 370 380 390 400 410 420 GVDLVKDRET KERAYDEAKK VVWRAYELGL IVAFLQGNVL RIEPPLTIEE EVLDEGLDKL 430 440 EEAIEDVEEG RVPDEVIEKV QGW

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD85400.1.
RefSeq	YP_183624.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JGG6.
ModBase	Search...
Protein-protein interaction databases
STRING	69014.TK1211.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAD85400; BAD85400; TK1211.
GeneID	3235094.
KEGG	tko:TK1211.
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K00823.
OMA	DHESKAR.
ProtClustDB	PRK08360.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5JGG6_PYRKO

Accession

Primary (citable) accession number: Q5JGG6

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)