Q5JGC6 (Q5JGC6_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable fumarate hydratase, beta subunit EMBL BAD86153.1

Gene names

Ordered Locus Names:

TK1964

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	172 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	hydro-lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JGC6 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 8FC3A9C1C9A0F7E2	FASTA	172	18,808
	10 20 30 40 50 60 MAVKLKTPLG EEVLELRAGD VVYLSGRIYT ARDAAHRKIL ELSKKGKLPF ELEGAVIYHC 70 80 90 100 110 120 GPVVRRKEDG WKVVSAGPTT SARMNRYLDE ILSLGVRGII GKGGMEVGPF VGRAVYFAFT 130 140 150 160 170 GGAGSLAAES VKRVVDVYWL DELGIPEAVW VLEVEDFPLL VAIDSRGNSL YR

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD86153.1.
RefSeq	YP_184377.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JGC6.
SMR	Q5JGC6. Positions 1-172.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000007774; EBPYRP00000007555; EBPYRG00000007773.
GeneID	3235625.
GenomeReviews	Gene locus TK1964 in contig AP006878_GR.
KEGG	tko:TK1964.
NMPDR	fig|69014.3.peg.1814.
Phylogenomic databases
eggNOG	arNOG09126.
GeneTree	EBGT00050000022930.
HOGENOM	HBG655206.
OMA	PLIVAMD.
PhylomeDB	Q5JGC6.
ProtClustDB	PRK08395.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1964-MONOMER.
Family and domain databases
InterPro	IPR004647. Fe-S_hydro-lyase_TtdB-typ_cat. [Graphical view]
Gene3D	G3DSA:3.20.130.10. TtdB_fumA_fumB. 1 hit.
KO	K01678.
Pfam	PF05683. Fumerase_C. 1 hit. [Graphical view]
SUPFAM	SSF117457. SSF117457. 1 hit.
TIGRFAMs	TIGR00723. TtdB_fumA_fumB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5JGC6_PYRKO

Accession

Primary (citable) accession number: Q5JGC6

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 16, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)