Q5JGC5 (Q5JGC5_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable fumarate hydratase, alpha subunit EMBL BAD86154.1

Gene names

Ordered Locus Names:

TK1965

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	286 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JGC5 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: DA4E5B901438EC65	FASTA	286	30,729
	10 20 30 40 50 60 MKDLVDPIVD AIKLAVTTIP GDTVKALKQA YESEESEIAR FNLGNILRAI EIGKSRIVPV 70 80 90 100 110 120 CQDTGTLTFF VKAGIGSPYL GEIERAIIEA TRRATLEIPL RPNAVDVLTG RNSGDNTGKG 130 140 150 160 170 180 VPVIRWELVE GSDVEIAVLP KGGGSENCSA LAMLTPAQGW EGVKRFVLER VTECGGKPCP 190 200 210 220 230 240 PIILGIGVGG GADYSLTLAK KALLRKVGER NPDERIAELE EELLTEVNSL GVGPMGMGGK 250 260 270 280 TTTLDVKIEI AHRHPASFPV GLVVQCWANR RAFLRIKADG RVEVWQ

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD86154.1.
RefSeq	YP_184378.1. NC_006624.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000008429; EBPYRP00000008210; EBPYRG00000008428.
GeneID	3235626.
GenomeReviews	Gene locus TK1965 in contig AP006878_GR.
KEGG	tko:TK1965.
NMPDR	fig|69014.3.peg.1832.
Phylogenomic databases
eggNOG	arNOG04925.
GeneTree	EBGT00050000023314.
HOGENOM	HBG548096.
OMA	IETYPTH.
PhylomeDB	Q5JGC5.
ProtClustDB	PRK06246.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1965-MONOMER.
Family and domain databases
InterPro	IPR004646. Fe-S_hydro-lyase_TtdA-typ_cat. [Graphical view]
KO	K01677.
Pfam	PF05681. Fumerase. 1 hit. [Graphical view]
TIGRFAMs	TIGR00722. TtdA_fumA_fumB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5JGC5_PYRKO

Accession

Primary (citable) accession number: Q5JGC5

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 16, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)