Q5JF72 (Q5JF72_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted site-specific integrase/resolvase EMBL BAD84844.1

Gene names

Ordered Locus Names:

TK0655

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	209 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro recombinase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JF72 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 3FF7A70CAAF0EAA8	FASTA	209	24,282
	10 20 30 40 50 60 MVVKEKLYTV KQASEILGVH PKTIQKWDKE GKIKTIRTPG GRRRIPESEI KRLLGISEEK 70 80 90 100 110 120 GLIIGYARVS SHTQKDDLER QVEAIKQYAK ERGWQVQILK DIGSGLNEKR KNYRKLLELV 130 140 150 160 170 180 AKGEVSKVII THPDRLTRFG FKTLEFFFKE NGSEIIVINE KEKPPREELI EDLITIISHF 190 200 AGKLYGMRSH KYKKLKKGMK KLIEEVEND

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD84844.1.
RefSeq	YP_183068.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JF72.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000008343; EBPYRP00000008124; EBPYRG00000008342.
GeneID	3234897.
GenomeReviews	Gene locus TK0655 in contig AP006878_GR.
KEGG	tko:TK0655.
NMPDR	fig|69014.3.peg.820.
Phylogenomic databases
eggNOG	arNOG07098.
GeneTree	EBGT00050000022274.
HOGENOM	HBG442468.
OMA	KRRVPES.
PhylomeDB	Q5JF72.
ProtClustDB	CLSK254474.
Enzyme and pathway databases
BioCyc	TKOD69014:TK0655-MONOMER.
Family and domain databases
InterPro	IPR009061. DNA-bd_dom_put. IPR006118. Recombinase_CS. IPR006119. Resolv_N. IPR000551. Tscrpt_reg_HTH_MerR. IPR010093. Xis_DNA-bd. [Graphical view]
Gene3D	G3DSA:3.40.50.1390. Resolv_N. 1 hit.
KO	K07450.
Pfam	PF00239. Resolvase. 1 hit. [Graphical view]
SMART	SM00857. Resolvase. 1 hit. [Graphical view]
SUPFAM	SSF46955. Putativ_DNA_bind. 1 hit. SSF53041. Resolv_N. 1 hit.
TIGRFAMs	TIGR01764. Excise. 1 hit.
PROSITE	PS50937. HTH_MERR_2. 1 hit. PS00397. RECOMBINASES_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5JF72_PYRKO

Accession

Primary (citable) accession number: Q5JF72

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	December 14, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)