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Q5JF26 (Q5JF26_PYRKO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TK0541
OrganismPyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1)) [Reference proteome] [HAMAP]
Taxonomic identifier69014 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q5JF26 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: 6668C3E2D424C30A

FASTA39644,032
        10         20         30         40         50         60 
MREFKKLTPY KEALGLLLND LSEIQEVEEV PLDEALGRVL AEDVVSPIDS PPFDRSAVDG 

        70         80         90        100        110        120 
YALRAEDTFQ AREYSPVELR VIDEIPAGGE SKKTVEPGTA VKLLTGAKIP EGANAVLMQE 

       130        140        150        160        170        180 
MAEREGDVIR VLRPVAPGQN VAMKGEDVRK GQVVLKKGQI LRPQDLAILK SIGFKTVRVR 

       190        200        210        220        230        240 
RKPRVGIIVT GSELIEEFDE EALNHGKILE SNSVMLKGLV RQYFGEPRFY GVIPDDEEKI 

       250        260        270        280        290        300 
GEAIRKARSE NDLVLVTGGS AFGDMDFAHR FVNLLFHGTT IKPGRPIGYG ERVFVMSGYP 

       310        320        330        340        350        360 
VAVFTQFHLY VKHALAKLVG ARNYETRVRA RLTERVPSQL GRYEFVKVWY ENGTARPIKK 

       370        380        390 
KGSGIISSLV ESNGYITIPE DSEGYLEGEE VEVVLY 

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References

[1]"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
Genome Res. 15:352-363(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-918 / JCM 12380 / KOD1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006878 Genomic DNA. Translation: BAD84730.1.
RefSeqYP_182954.1. NC_006624.1.

3D structure databases

ProteinModelPortalQ5JF26.
SMRQ5JF26. Positions 6-396.
ModBaseSearch...

Protein-protein interaction databases

STRING69014.TK0541.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD84730; BAD84730; TK0541.
GeneID3235452.
KEGGtko:TK0541.

Phylogenomic databases

eggNOGCOG0303.
HOGENOMHOG000280651.
KOK03750.
OMAAVVMYED.
ProtClustDBCLSK253401.

Family and domain databases

Gene3D2.40.340.10. 1 hit.
3.40.980.10. 1 hit.
InterProIPR005111. MoeA_C_domain_IV.
IPR005110. MoeA_linker/N.
IPR001453. Mopterin-bd_dom.
[Graphical view]
PfamPF00994. MoCF_biosynth. 1 hit.
PF03454. MoeA_C. 1 hit.
PF03453. MoeA_N. 1 hit.
[Graphical view]
SMARTSM00852. MoCF_biosynth. 1 hit.
[Graphical view]
SUPFAMSSF53218. MoCF_biosynth. 1 hit.
SSF63867. MoeA_C. 1 hit.
SSF63882. MoeA_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5JF26_PYRKO
AccessionPrimary (citable) accession number: Q5JF26
Entry history
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)