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Q5JER7 (Q5JER7_THEKO) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5JER7 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: FCC131A93DC03123

FASTA46152,214
        10         20         30         40         50         60 
MKKFVALLIT MFFVVSMAAV AQPASAAKYS ELEEGGVIMQ AFYWDVPAGG IWWDTIRSKI 

        70         80         90        100        110        120 
PEWYEAGISA IWIPPASKGM GGAYSMGYDP YDFFDLGEYN QKGTVETRFG SKQELINMIN 

       130        140        150        160        170        180 
TAHAYGIKVI ADIVINHRAG GDLEWNPFVG DYTWTDFSKV ASGKYTANYL DFHPNEVKCC 

       190        200        210        220        230        240 
DEGTFGGFPD IAHEKEWDQH WLWASDESYA AYLRSIGVDA WRFDYVKGYG AWVVKDWLNW 

       250        260        270        280        290        300 
WGGWAVGEYW DTNVDALLNW AYSSGAKVFD FPLYYKMDEA FDNTNIPALV DALQNGGTVV 

       310        320        330        340        350        360 
SRDPFKAVTF VANHDTDIIW NKYPAYAFIL TYEGQPVIFY RDYEEWLNKD KLNNLIWIHD 

       370        380        390        400        410        420 
HLAGGSTSIV YYDSDELIFV RNGDSKRPGL ITYINLGSSK VGRWVYVPKF AGACIHEYTG 

       430        440        450        460 
NLGGWVDKYV ESSGWVYLEA PAYDPASGQY GYTVWSYCGV G 

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References

[1]"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
Genome Res. 15:352-363(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-918 / JCM 12380 / KOD1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006878 Genomic DNA. Translation: BAD86073.1.
RefSeqYP_184297.1. NC_006624.1.

3D structure databases

ProteinModelPortalQ5JER7.
SMRQ5JER7. Positions 27-461.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING69014.TK1884.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD86073; BAD86073; TK1884.
GeneID3235729.
KEGGtko:TK1884.

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000031038.
KOK01176.
OMAQAFYWDV.
ProtClustDBPRK09441.

Enzyme and pathway databases

BioCycTKOD69014:GH72-1921-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5JER7_THEKO
AccessionPrimary (citable) accession number: Q5JER7
Entry history
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: November 13, 2013
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)