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Q5JER7

- Q5JER7_THEKO

UniProt

Q5JER7 - Q5JER7_THEKO

Protein
Submitted name:

Alpha-amylase, GH13 family

Gene

TK1884

Organism
Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (15 Feb 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciTKOD69014:GH72-1921-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylase, GH13 familyImported
    Gene namesi
    Ordered Locus Names:TK1884Imported
    OrganismiThermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))Imported
    Taxonomic identifieri69014 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
    ProteomesiUP000000536: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi69014.TK1884.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5JER7.
    SMRiQ5JER7. Positions 27-461.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000031038.
    KOiK01176.
    OMAiYRDYEEW.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5JER7-1 [UniParc]FASTAAdd to Basket

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    MKKFVALLIT MFFVVSMAAV AQPASAAKYS ELEEGGVIMQ AFYWDVPAGG    50
    IWWDTIRSKI PEWYEAGISA IWIPPASKGM GGAYSMGYDP YDFFDLGEYN 100
    QKGTVETRFG SKQELINMIN TAHAYGIKVI ADIVINHRAG GDLEWNPFVG 150
    DYTWTDFSKV ASGKYTANYL DFHPNEVKCC DEGTFGGFPD IAHEKEWDQH 200
    WLWASDESYA AYLRSIGVDA WRFDYVKGYG AWVVKDWLNW WGGWAVGEYW 250
    DTNVDALLNW AYSSGAKVFD FPLYYKMDEA FDNTNIPALV DALQNGGTVV 300
    SRDPFKAVTF VANHDTDIIW NKYPAYAFIL TYEGQPVIFY RDYEEWLNKD 350
    KLNNLIWIHD HLAGGSTSIV YYDSDELIFV RNGDSKRPGL ITYINLGSSK 400
    VGRWVYVPKF AGACIHEYTG NLGGWVDKYV ESSGWVYLEA PAYDPASGQY 450
    GYTVWSYCGV G 461
    Length:461
    Mass (Da):52,214
    Last modified:February 15, 2005 - v1
    Checksum:iFCC131A93DC03123
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006878 Genomic DNA. Translation: BAD86073.1.
    RefSeqiYP_184297.1. NC_006624.1.

    Genome annotation databases

    EnsemblBacteriaiBAD86073; BAD86073; TK1884.
    GeneIDi3235729.
    KEGGitko:TK1884.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006878 Genomic DNA. Translation: BAD86073.1 .
    RefSeqi YP_184297.1. NC_006624.1.

    3D structure databases

    ProteinModelPortali Q5JER7.
    SMRi Q5JER7. Positions 27-461.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 69014.TK1884.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD86073 ; BAD86073 ; TK1884 .
    GeneIDi 3235729.
    KEGGi tko:TK1884.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000031038.
    KOi K01176.
    OMAi YRDYEEW.

    Enzyme and pathway databases

    BioCyci TKOD69014:GH72-1921-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
      Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
      Genome Res. 15:352-363(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-918 / JCM 12380 / KOD1Imported.

    Entry informationi

    Entry nameiQ5JER7_THEKO
    AccessioniPrimary (citable) accession number: Q5JER7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 15, 2005
    Last sequence update: February 15, 2005
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3