Unreviewed, UniProtKB/TrEMBL Q5JDV2 (Q5JDV2_PYRKO)

Names and origin

Protein names

Submitted name:
    Membrane-bound beta-glycosidase, GH1 family EMBL BAD86016.1

Gene names

Ordered Locus Names:

TK1827

Organism

Pyrococcus kodakaraensis (Thermococcus kodakaraensis) [Complete proteome] [HAMAP]

Taxonomic identifier

311400 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	412 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690V1

Ontologies

Keywords
Molecular function	Glycosidase EMBL BAD86016.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JDV2-1 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 1659A9B552E71BAA	FASTA	412	48,534
	10 20 30 40 50 60 MLSMFPEKFL FGTSTAAHQV EGDNKWNDWW YYEEMGKLPY KSGKACNHWE LYREDIELMA 70 80 90 100 110 120 ELGYNAYRFS IEWSRLFPEE GKFNEDAFNR YREIIELLLE KGITPNVTLH HFTSPLWFMR 130 140 150 160 170 180 KGGFLKEENL KYWEGYVDKA AELLKGVKLV ATFNEPLVYV TMGYLTAYWP PFIKSPFKSF 190 200 210 220 230 240 RVAANLLKAH AIAYELLHGK FQVGIVKHIR VMLPERKGDE KAAQKADNLF NWYFLDAIWS 250 260 270 280 290 300 GKYRGAFKTY SVPESDADFI GVNYYTASTV RRSLNPLKMF FEAKDAEIGE RRTQMGWSVY 310 320 330 340 350 360 PEGVYLALRR ASEYGRPLYV TENGIATLDD EWRKEFIIQH LRQVLRAIED GLDVRGYFYW 370 380 390 400 410 SLMDNYEWRE GFEPRFGLIE VDFETFERRP RGSAYLYGEI ARTKKLPGEE DP

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KOD1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AP006878 Genomic DNA. Translation: BAD86016.1.
RefSeq	YP_184240.1.
3D structure databases
SMR	Q5JDV2. Positions 5-409.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5JDV2.
Protein family/group databases
CAZy	GH1. Glycoside Hydrolase Family 1.
Genome annotation databases
GeneID	3235412.
GenomeReviews	Gene locus TK1827 in contig AP006878_GR.
KEGG	tko:TK1827.
NMPDR	fig|69014.3.peg.1677.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q5JDV2.
OMA	YQPFFAL.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1827-MON.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR017853. Glyco_hydro_catalytic_core. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 1 hit. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5JDV2_PYRKO

Accession

Primary (citable) accession number: Q5JDV2

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	November 3, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)