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Protein
Submitted name:

Membrane-bound beta-glycosidase, GH1 family

Gene

TK1827

Organism
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciTKOD69014:GH72-1864-MONOMER.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Submitted name:
Membrane-bound beta-glycosidase, GH1 familyImported
Gene namesi
Ordered Locus Names:TK1827Imported
OrganismiThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))Imported
Taxonomic identifieri69014 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus
Proteomesi
  • UP000000536 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi69014.TK1827.

Structurei

3D structure databases

ProteinModelPortaliQ5JDV2.
SMRiQ5JDV2. Positions 5-409.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG05412. Archaea.
COG2723. LUCA.
HOGENOMiHOG000088630.
InParanoidiQ5JDV2.
KOiK05350.
OMAiFQATHYV.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5JDV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSMFPEKFL FGTSTAAHQV EGDNKWNDWW YYEEMGKLPY KSGKACNHWE
60 70 80 90 100
LYREDIELMA ELGYNAYRFS IEWSRLFPEE GKFNEDAFNR YREIIELLLE
110 120 130 140 150
KGITPNVTLH HFTSPLWFMR KGGFLKEENL KYWEGYVDKA AELLKGVKLV
160 170 180 190 200
ATFNEPLVYV TMGYLTAYWP PFIKSPFKSF RVAANLLKAH AIAYELLHGK
210 220 230 240 250
FQVGIVKHIR VMLPERKGDE KAAQKADNLF NWYFLDAIWS GKYRGAFKTY
260 270 280 290 300
SVPESDADFI GVNYYTASTV RRSLNPLKMF FEAKDAEIGE RRTQMGWSVY
310 320 330 340 350
PEGVYLALRR ASEYGRPLYV TENGIATLDD EWRKEFIIQH LRQVLRAIED
360 370 380 390 400
GLDVRGYFYW SLMDNYEWRE GFEPRFGLIE VDFETFERRP RGSAYLYGEI
410
ARTKKLPGEE DP
Length:412
Mass (Da):48,534
Last modified:February 15, 2005 - v1
Checksum:i1659A9B552E71BAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA. Translation: BAD86016.1.

Genome annotation databases

EnsemblBacteriaiBAD86016; BAD86016; TK1827.
KEGGitko:TK1827.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006878 Genomic DNA. Translation: BAD86016.1.

3D structure databases

ProteinModelPortaliQ5JDV2.
SMRiQ5JDV2. Positions 5-409.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi69014.TK1827.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD86016; BAD86016; TK1827.
KEGGitko:TK1827.

Phylogenomic databases

eggNOGiarCOG05412. Archaea.
COG2723. LUCA.
HOGENOMiHOG000088630.
InParanoidiQ5JDV2.
KOiK05350.
OMAiFQATHYV.

Enzyme and pathway databases

BioCyciTKOD69014:GH72-1864-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5JDV2_THEKO
AccessioniPrimary (citable) accession number: Q5JDV2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.