Q5JDV2 (Q5JDV2_PYRKO) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 47.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Membrane-bound beta-glycosidase, GH1 family EMBL BAD86016.1 | ||
| Gene names |
| ||
| Organism | Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1)) | ||
| Taxonomic identifier | 69014 [NCBI] | ||
| Taxonomic lineage | Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus |
Protein attributes
| Sequence length | 412 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Sequence similarities | Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690 |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Glycosidase EMBL BAD86016.1 Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compoundsInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP006878 Genomic DNA. Translation: BAD86016.1. |
| RefSeq | YP_184240.1. NC_006624.1. |
3D structure databases | |
| ProteinModelPortal | Q5JDV2. |
| SMR | Q5JDV2. Positions 5-409. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH1. Glycoside Hydrolase Family 1. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | EBPYRT00000008122; EBPYRP00000007903; EBPYRG00000008121. |
| GeneID | 3235412. |
| GenomeReviews | Gene locus TK1827 in contig AP006878_GR. |
| KEGG | tko:TK1827. |
| NMPDR | fig|69014.3.peg.1677. |
Phylogenomic databases | |
| eggNOG | arNOG04026. |
| GeneTree | EBGT00050000023099. |
| HOGENOM | HBG316462. |
| OMA | ACNHWEL. |
| PhylomeDB | Q5JDV2. |
| ProtClustDB | CLSK689645. |
Enzyme and pathway databases | |
| BioCyc | TKOD69014:TK1827-MONOMER. |
Family and domain databases | |
| InterPro | IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| KO | K01188. |
| PANTHER | PTHR10353. Glyco_hydro_1. 1 hit. |
| Pfam | PF00232. Glyco_hydro_1. 1 hit. [Graphical view] |
| PRINTS | PR00131. GLHYDRLASE1. |
| SUPFAM | SSF51445. Glyco_hydro_cat. 1 hit. |
| PROSITE | PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q5JDV2_PYRKO | ||||||||
| Accession | Primary (citable) accession number: Q5JDV2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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