Q5JDU9 (Q5JDU9_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable alpha-amylase, GH57 family EMBL BAD86019.1

Gene names

Ordered Locus Names:

TK1830

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	361 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JDU9 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 8F51D1E33CF8EADE	FASTA	361	40,609
	10 20 30 40 50 60 MMSLVFHGNL QYAEIPKSEI PKVIEKAYLP VIGRLLKEEI PFGLNITGYT LEILPREVIE 70 80 90 100 110 120 LVREGIAGGL IEIIGTSYTH AILPLLPLDR VEAQVRKDRE LKEELFEVSP KGFWLPELAY 130 140 150 160 170 180 DPIIPAILKD NGYGYVFADG EAMLLSDHLN SAVKPIKPLY PHLIKAQRGE GNVFLNYILG 190 200 210 220 230 240 LRELKKAVEK AFPGKVTLEA VKNIDAVPVW VAINTAVMLG IGRFPLMNPK KAANWLRGKD 250 260 270 280 290 300 DVLLYGTDIE FIGYRDLAGR RMSIDGLLEV VKALNVELSL PSELKHSGRK LYLRTSSWAP 310 320 330 340 350 360 DKSLRIWTED EGNARLNMLT PFVGEPLAFL AENSDARGWE PLPERRLDAF RAIYNDWRGS K

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD86019.1.
RefSeq	YP_184243.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JDU9.
ModBase	Search...
Protein family/group databases
CAZy	GH57. Glycoside Hydrolase Family 57.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000007248; EBPYRP00000007029; EBPYRG00000007247.
GeneID	3234364.
GenomeReviews	Gene locus TK1830 in contig AP006878_GR.
KEGG	tko:TK1830.
NMPDR	fig|69014.3.peg.1680.
Phylogenomic databases
eggNOG	arNOG18192.
GeneTree	EBGT00050000023476.
HOGENOM	HBG243689.
OMA	PELAYDP.
ProtClustDB	CLSK253356.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1830-MONOMER.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR004300. Glyco_hydro_57_N. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF03065. Glyco_hydro_57. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5JDU9_PYRKO

Accession

Primary (citable) accession number: Q5JDU9

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	October 19, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)