Q5JDT7 (Q5JDT7_PYRKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-glycosidase, GH1 family EMBL BAD85950.1

Gene names

Ordered Locus Names:

TK1761

Organism

Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1))

Taxonomic identifier

69014 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Molecular function	Glycosidase EMBL BAD85950.1 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5JDT7 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: F9094433C65AE34F	FASTA	484	56,329
	10 20 30 40 50 60 MREFAWGVVQ SAFQFEMGDP LRRFIDTRTD WWHWVRDPLN IKNDLVSGHL PEDGINNYGL 70 80 90 100 110 120 YEIDHQLAKD MGLNAYQITV EWSRIFPCPT YGVEVDFERD SYGLIKRVKI TKETLHELEE 130 140 150 160 170 180 IANAKEVEHY REVLKNLKEL GFSTFVTLNH QTQPIWLHDP IHVRENFEKA RAKGWVDERA 190 200 210 220 230 240 ILEFAKFAAF VAWKLGDLVD FWATFDEPMV TVELGYLAPY VGWPPGILNP KAAKAVIINQ 250 260 270 280 290 300 LVGHARAYEA VKTFSDKPVG IILNIIPAYP RDPNDPKDVK ATENYDLFHN RIFLDGVNEG 310 320 330 340 350 360 KVDLDFDGNY VKIDHLKRND WIGNNYYTRE VIRYTEPKYE ELPIINFVGT EGYGYSSEPN 370 380 390 400 410 420 SVSKDNNPTS DFGWECFPQG MYDSIMIGNE YRKPIYITEN GIADSRDLLR PRYIKEHVEK 430 440 450 460 470 480 MFEAIQAGAD VRGYFHWALT DNYEWAMGFK IKFGLYEVDP ISKQRIPRPR SVETYKKIVR EGLP

References

[1]

"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes." Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T. Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-918 / JCM 12380 / KOD1 and KOD1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006878 Genomic DNA. Translation: BAD85950.1.
RefSeq	YP_184174.1. NC_006624.1.
3D structure databases
ProteinModelPortal	Q5JDT7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000007834; EBPYRP00000007615; EBPYRG00000007833.
GeneID	3235438.
GenomeReviews	Gene locus TK1761 in contig AP006878_GR.
KEGG	tko:TK1761.
NMPDR	fig|69014.3.peg.1611.
Phylogenomic databases
eggNOG	arNOG04026.
GeneTree	EBGT00050000023099.
HOGENOM	HBG316462.
OMA	RNDWIGN.
PhylomeDB	Q5JDT7.
ProtClustDB	CLSK865140.
Enzyme and pathway databases
BioCyc	TKOD69014:TK1761-MONOMER.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01190.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 2 hits. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5JDT7_PYRKO

Accession

Primary (citable) accession number: Q5JDT7

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	December 14, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)