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Protein

60S ribosomal protein L6

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L6UniRule annotation
OrganismiTriticum aestivum (Wheat)Imported
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticeaeTriticum

Organism-specific databases

GrameneiQ5I7L4.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00LG1-219[»]
4V7Eelectron microscopy5.50CE1-219[»]
ProteinModelPortaliQ5I7L4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L6e family.UniRule annotation

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR000915. 60S_ribosomal_L6E.
IPR014722. Rib_L2_dom2.
IPR005568. Ribosomal_L6_N.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10715. PTHR10715. 1 hit.
PfamiPF01159. Ribosomal_L6e. 1 hit.
PF03868. Ribosomal_L6e_N. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01170. RIBOSOMAL_L6E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5I7L4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPTSKMALG IKRASRSHTY HRRGLWAIKA KHGGALPKAE KPAAIAEPKF
60 70 80 90 100
YPADDVKPRT VSTRKPHPTK LRSTITPGTV LILLAGRYMG KRVVFLKQLQ
110 120 130 140 150
SGLLLITGPF KINGVPIRRV NQAYVIATST KVDISKVNVQ KFDDKYFARE
160 170 180 190 200
KKTRAKKTEG ELFESDKEAT KNLPDFKKDD QKVIDAELIK AIDAVPDLKN
210
YLGARFSLRD GDKPHEMTF
Length:219
Mass (Da):24,541
Last modified:February 15, 2005 - v1
Checksum:iE9337491ADC0E334
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846820 mRNA. Translation: AAW50981.1.
UniGeneiTa.14445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846820 mRNA. Translation: AAW50981.1.
UniGeneiTa.14445.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00LG1-219[»]
4V7Eelectron microscopy5.50CE1-219[»]
ProteinModelPortaliQ5I7L4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GrameneiQ5I7L4.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR000915. 60S_ribosomal_L6E.
IPR014722. Rib_L2_dom2.
IPR005568. Ribosomal_L6_N.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10715. PTHR10715. 1 hit.
PfamiPF01159. Ribosomal_L6e. 1 hit.
PF03868. Ribosomal_L6e_N. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01170. RIBOSOMAL_L6E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Yao Y.Y., Ni Z.F., Sun Q.X.
    Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)."
    Yao Y., Ni Z., Du J., Wang X., Wu H., Sun Q.
    Plant Sci. 170:579-586(2006)
    [AGRICOLA] [Europe PMC]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. "The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes."
    Myasnikov A.G., Afonina Z.A., Menetret J.F., Shirokov V.A., Spirin A.S., Klaholz B.P.
    Nat. Commun. 5:5294-5294(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (34.00 ANGSTROMS).
  4. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).

Entry informationi

Entry nameiQ5I7L4_WHEAT
AccessioniPrimary (citable) accession number: Q5I7L4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: June 24, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.