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Protein

Ribosomal protein

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal proteinUniRule annotation
OrganismiTriticum aestivum (Wheat)Imported
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeTriticeaeTriticum
ProteomesiUP000019116: Unplaced

Organism-specific databases

GrameneiQ5I7L3.

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V7Eelectron microscopy5.50Cz1-216[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L1P family.UniRule annotation

Phylogenomic databases

OMAiQWQNIKS.

Family and domain databases

Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5I7L3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKLQSDAVK DAITQIVGEA REKKRKFTET VELQIGLKNY DPQKDKRFSG
60 70 80 90 100
SVKLPHIPRP KMRVCMLGDA QHVDQAEKMG LDYMDVESLK KMNKNKKLVK
110 120 130 140 150
KLAKKYHAFL ASEAIIKQIP RLLGPGLNKA GKFPTLVSHQ ESLEAKVNET
160 170 180 190 200
KATVKFQLKK VLCMGVAVGN LSMDEKQIQQ NIQMSVNFLV SLLKKNWQNV
210
RCLYVKSTMG KRVRVF
Length:216
Mass (Da):24,558
Last modified:February 15, 2005 - v1
Checksum:i2EF713029B6A6C5F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846821 mRNA. Translation: AAW50982.1.
UniGeneiTa.54550.

Genome annotation databases

EnsemblPlantsiTraes_7AS_10300DA90.1; Traes_7AS_10300DA90.1; Traes_7AS_10300DA90.
Traes_7BS_9318744B2.1; Traes_7BS_9318744B2.1; Traes_7BS_9318744B2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846821 mRNA. Translation: AAW50982.1.
UniGeneiTa.54550.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V7Eelectron microscopy5.50Cz1-216[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiTraes_7AS_10300DA90.1; Traes_7AS_10300DA90.1; Traes_7AS_10300DA90.
Traes_7BS_9318744B2.1; Traes_7BS_9318744B2.1; Traes_7BS_9318744B2.

Organism-specific databases

GrameneiQ5I7L3.

Phylogenomic databases

OMAiQWQNIKS.

Family and domain databases

Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Yao Y.Y., Ni Z.F., Sun Q.X.
    Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)."
    Yao Y., Ni Z., Du J., Wang X., Wu H., Sun Q.
    Plant Sci. 170:579-586(2006)
    [AGRICOLA] [Europe PMC]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: cv. Chinese SpringImported.
  4. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
  5. EnsemblPlants
    Submitted (OCT-2014) to UniProtKB
    Cited for: IDENTIFICATION.
  6. EnsemblPlants
    Submitted (JAN-2015) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ5I7L3_WHEAT
AccessioniPrimary (citable) accession number: Q5I7L3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: March 4, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.