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Protein
Submitted name:

Ribosomal protein L13a

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein L13aImported
Submitted name:
Uncharacterized proteinImported
OrganismiTriticum aestivum (Wheat)Imported
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticeaeTriticum
ProteomesiUP000019116 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00LK1-206[»]
4V7Eelectron microscopy5.50CO1-206[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L13P family.UniRule annotation

Phylogenomic databases

OMAiQLAYERK.

Family and domain databases

Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13.
InterProiIPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR023564. Ribosomal_L13_dom.
IPR005755. Ribosomal_L13_euk/arc.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF3. PTHR11545:SF3. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiPS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5I7L1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSGSGVCAK RVVVDARHHM LGRLASIVAK ELLNGQRVVV VRCEEICMSG
60 70 80 90 100
GLVRQKMKYL RFLRKRMNTK PSHGPIHFRA PAKILWRTIR GMIPHKTARG
110 120 130 140 150
EAALARLKAY EGVPPPYDRT KRMVIPDALK VLRLQPGHRY CLLGQLSKEV
160 170 180 190 200
GWNYADTIRE LEEKRKEKAK VSYDRRKQLA KLRVKAEKAA EEKLGTQLEI

LAPIKY
Length:206
Mass (Da):23,530
Last modified:February 15, 2005 - v1
Checksum:iBC9E961672CE99CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846823 mRNA. Translation: AAW50984.1.
UniGeneiTa.8404.

Genome annotation databases

EnsemblPlantsiTraes_5DL_F12AF5F51.1; Traes_5DL_F12AF5F51.1; Traes_5DL_F12AF5F51.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846823 mRNA. Translation: AAW50984.1.
UniGeneiTa.8404.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V3Pelectron microscopy34.00LK1-206[»]
4V7Eelectron microscopy5.50CO1-206[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiTraes_5DL_F12AF5F51.1; Traes_5DL_F12AF5F51.1; Traes_5DL_F12AF5F51.

Phylogenomic databases

OMAiQLAYERK.

Family and domain databases

Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13.
InterProiIPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR023564. Ribosomal_L13_dom.
IPR005755. Ribosomal_L13_euk/arc.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF3. PTHR11545:SF3. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiPS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Yao Y.Y., Ni Z.F., Sun Q.X.
    Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)."
    Yao Y., Ni Z., Du J., Wang X., Wu H., Sun Q.
    Plant Sci. 170:579-586(2006)
    [AGRICOLA] [Europe PMC]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: cv. Chinese SpringImported.
  4. "The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes."
    Myasnikov A.G., Afonina Z.A., Menetret J.F., Shirokov V.A., Spirin A.S., Klaholz B.P.
    Nat. Commun. 5:5294-5294(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (34.00 ANGSTROMS).
  5. "Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
    Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
    Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
  6. EnsemblPlants
    Submitted (FEB-2015) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ5I7L1_WHEAT
AccessioniPrimary (citable) accession number: Q5I7L1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: June 24, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.