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Q5I7L1 (Q5I7L1_WHEAT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EnsemblPlants Traes_5DL_F12AF5F51.1
OrganismTriticum aestivum (Wheat) [Complete proteome] EMBL AAW50984.1
Taxonomic identifier4565 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeTriticeaeTriticum

Protein attributes

Sequence length206 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L13P family. RuleBase RU003877

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q5I7L1 [UniParc].

Last modified February 15, 2005. Version 1.
Checksum: BC9E961672CE99CB

FASTA20623,530
        10         20         30         40         50         60 
MVSGSGVCAK RVVVDARHHM LGRLASIVAK ELLNGQRVVV VRCEEICMSG GLVRQKMKYL 

        70         80         90        100        110        120 
RFLRKRMNTK PSHGPIHFRA PAKILWRTIR GMIPHKTARG EAALARLKAY EGVPPPYDRT 

       130        140        150        160        170        180 
KRMVIPDALK VLRLQPGHRY CLLGQLSKEV GWNYADTIRE LEEKRKEKAK VSYDRRKQLA 

       190        200 
KLRVKAEKAA EEKLGTQLEI LAPIKY 

« Hide

References

[1]Yao Y.Y., Ni Z.F., Sun Q.X.
Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)."
Yao Y., Ni Z., Du J., Wang X., Wu H., Sun Q.
Plant Sci. 170:579-586(2006) [AGRICOLA] [Europe PMC]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Analysis of the bread wheat genome using whole-genome shotgun sequencing."
Brenchley R., Spannagl M., Pfeifer M., Barker G.L., D'Amore R., Allen A.M., McKenzie N., Kramer M., Kerhornou A., Bolser D., Kay S., Waite D., Trick M., Bancroft I., Gu Y., Huo N., Luo M.C., Sehgal S. expand/collapse author list , Gill B., Kianian S., Anderson O., Kersey P., Dvorak J., McCombie W.R., Hall A., Mayer K.F., Edwards K.J., Bevan M.W., Hall N.
Nature 491:705-710(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Separating homeologs by phasing in the tetraploid wheat transcriptome."
Krasileva K.V., Buffalo V., Bailey P., Pearce S., Ayling S., Tabbita F., Soria M., Wang S., Akhunov E., Uauy C., Dubcovsky J.
Genome Biol. 14:R66-R66(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion."
Gogala M., Becker T., Beatrix B., Armache J.P., Barrio-Garcia C., Berninghausen O., Beckmann R.
Nature 506:107-110(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
[6]EnsemblPlants
Submitted (JAN-2014) to UniProtKB
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY846823 mRNA. Translation: AAW50984.1.
UniGeneTa.8404.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3J61electron microscopy5.50O1-206[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsTraes_5DL_F12AF5F51.1; Traes_5DL_F12AF5F51.1; Traes_5DL_F12AF5F51.

Organism-specific databases

GrameneQ5I7L1.

Family and domain databases

Gene3D3.90.1180.10. 1 hit.
InterProIPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR023564. Ribosomal_L13_dom.
IPR005755. Ribosomal_L13_euk/arc.
[Graphical view]
PANTHERPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF3. PTHR11545:SF3. 1 hit.
PfamPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
PIRSFPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMSSF52161. SSF52161. 1 hit.
TIGRFAMsTIGR01077. L13_A_E. 1 hit.
PROSITEPS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5I7L1_WHEAT
AccessionPrimary (citable) accession number: Q5I7L1
Entry history
Integrated into UniProtKB/TrEMBL: February 15, 2005
Last sequence update: February 15, 2005
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)