Q5I7K9 (RL30_WHEAT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: 60S ribosomal protein L30
Organism	Triticum aestivum (Wheat)
Taxonomic identifier	4565 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Pooideae › Triticeae › Triticum

Protein attributes

Sequence length	112 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Tissue specificity	Expressed in roots and leaves. Ref.1
Sequence similarities	Belongs to the ribosomal protein L30e family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	3D-structure
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 112

112

60S ribosomal protein L30

PRO_0000247609

Experimental info

Sequence conflict

42

1

L → E in AAW50986. Ref.1

Sequence conflict

62

1

T → C in AAW50986. Ref.1

Sequence conflict

106

1

S → N in AAW50986. Ref.1

Secondary structure

1

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112

Helix Strand Turn

Details...

Helix

15 – 24

10

Beta strand

28 – 30

3

Helix

31 – 39

9

Beta strand

45 – 48

4

Helix

56 – 66

11

Beta strand

70 – 73

4

Helix

80 – 86

7

Beta strand

92 – 97

6

Sequences

	Sequence		Length	Mass (Da)
	Q5I7K9 [UniParc]. Last modified July 25, 2006. Version 2. Checksum: 20A798FE5B5D58E9	FASTA	112	12,275
	10 20 30 40 50 60 MAPTKKAKKS GENINNKLQL VMKSGKYTLG YKTVLKTLRS SLGKLIILAN NCPPLRKSEI 70 80 90 100 110 ETYAMLAKIS VHHFHGNNVD LGTACGKYYR VCCLSILDPG DSDIISTTTT TQ

References

[1]	"Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)." Yao Y.Y., Ni Z.F., Du J., Wang X., Wu H., Sun Q.X. Plant Sci. 170:579-586(2006) [AGRICOLA] [Europe PMC] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
[2]	"Localization and dynamic behavior of ribosomal protein L30e." Halic M., Becker T., Frank J., Spahn C.M.T., Beckmann R. Nat. Struct. Mol. Biol. 12:467-468(2005) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (9.5 ANGSTROMS) OF 6-109.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AY846825 mRNA. Translation: AAW50986.1.

UniGene

Ta.28375.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1YSH	electron microscopy	9.50	C	6-109	[»]
3IZR	electron microscopy	5.50	f	1-112	[»]

ProteinModelPortal

Q5I7K9.

SMR

Q5I7K9. Positions 6-109.

ModBase

Search...

Proteomic databases

PRIDE

Q5I7K9.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Organism-specific databases

Gramene

Q5I7K9.

Family and domain databases

InterPro

IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]

PANTHER

PTHR11449. PTHR11449. 1 hit.

Pfam

PF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]

PROSITE

PS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

Q5I7K9.

Entry information

Entry name

RL30_WHEAT

Accession

Primary (citable) accession number: Q5I7K9

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	November 28, 2012
This is version 35 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program