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Protein

60S ribosomal protein L30

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L30
OrganismiTriticum aestivum (Wheat)
Taxonomic identifieri4565 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeTriticeaeTriticum
ProteomesiUP000019116: Unplaced

Organism-specific databases

GrameneiQ5I7K9.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 11211260S ribosomal protein L30PRO_0000247609Add
BLAST

Proteomic databases

PRIDEiQ5I7K9.

Expressioni

Tissue specificityi

Expressed in roots and leaves.1 Publication

Structurei

Secondary structure

1
112
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi15 – 2410
Beta strandi28 – 303
Helixi31 – 399
Beta strandi45 – 484
Helixi56 – 6611
Beta strandi70 – 734
Helixi80 – 867
Beta strandi92 – 976

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1YSHelectron microscopy9.50C6-109[»]
4V7Eelectron microscopy5.50c1-112[»]
ProteinModelPortaliQ5I7K9.
SMRiQ5I7K9. Positions 6-109.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5I7K9.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30e family.Curated

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PANTHERiPTHR11449. PTHR11449. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5I7K9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAPTKKAKKS GENINNKLQL VMKSGKYTLG YKTVLKTLRS SLGKLIILAN
60 70 80 90 100
NCPPLRKSEI ETYAMLAKIS VHHFHGNNVD LGTACGKYYR VCCLSILDPG
110
DSDIISTTTT TQ
Length:112
Mass (Da):12,275
Last modified:July 25, 2006 - v2
Checksum:i20A798FE5B5D58E9
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti42 – 421L → E in AAW50986. 1 PublicationCurated
Sequence conflicti62 – 621T → C in AAW50986. 1 PublicationCurated
Sequence conflicti106 – 1061S → N in AAW50986. 1 PublicationCurated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846825 mRNA. Translation: AAW50986.1.
UniGeneiTa.28375.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY846825 mRNA. Translation: AAW50986.1.
UniGeneiTa.28375.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1YSHelectron microscopy9.50C6-109[»]
4V7Eelectron microscopy5.50c1-112[»]
ProteinModelPortaliQ5I7K9.
SMRiQ5I7K9. Positions 6-109.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ5I7K9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GrameneiQ5I7K9.

Miscellaneous databases

EvolutionaryTraceiQ5I7K9.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PANTHERiPTHR11449. PTHR11449. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)."
    Yao Y.Y., Ni Z.F., Du J., Wang X., Wu H., Sun Q.X.
    Plant Sci. 170:579-586(2006)
    [AGRICOLA] [Europe PMC]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
  2. "Localization and dynamic behavior of ribosomal protein L30e."
    Halic M., Becker T., Frank J., Spahn C.M.T., Beckmann R.
    Nat. Struct. Mol. Biol. 12:467-468(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (9.5 ANGSTROMS) OF 6-109.

Entry informationi

Entry nameiRL30_WHEAT
AccessioniPrimary (citable) accession number: Q5I7K9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2006
Last sequence update: July 25, 2006
Last modified: February 4, 2015
This is version 42 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.