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Q5I7K9

- RL30_WHEAT

UniProt

Q5I7K9 - RL30_WHEAT

Protein

60S ribosomal protein L30

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L30
    OrganismiTriticum aestivum (Wheat)
    Taxonomic identifieri4565 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladePooideaeTriticeaeTriticum
    ProteomesiUP000019116: Unplaced

    Organism-specific databases

    GrameneiQ5I7K9.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 11211260S ribosomal protein L30PRO_0000247609Add
    BLAST

    Proteomic databases

    PRIDEiQ5I7K9.

    Expressioni

    Tissue specificityi

    Expressed in roots and leaves.1 Publication

    Structurei

    Secondary structure

    1
    112
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi15 – 2410
    Beta strandi28 – 303
    Helixi31 – 399
    Beta strandi45 – 484
    Helixi56 – 6611
    Beta strandi70 – 734
    Helixi80 – 867
    Beta strandi92 – 976

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1YSHelectron microscopy9.50C6-109[»]
    3J61electron microscopy5.50c1-112[»]
    ProteinModelPortaliQ5I7K9.
    SMRiQ5I7K9. Positions 6-109.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ5I7K9.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L30e family.Curated

    Family and domain databases

    Gene3Di3.30.1330.30. 1 hit.
    InterProiIPR029064. L30e-like.
    IPR000231. Ribosomal_L30e.
    IPR022991. Ribosomal_L30e_CS.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    [Graphical view]
    PANTHERiPTHR11449. PTHR11449. 1 hit.
    PfamiPF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view]
    SUPFAMiSSF55315. SSF55315. 1 hit.
    PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
    PS00993. RIBOSOMAL_L30E_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5I7K9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPTKKAKKS GENINNKLQL VMKSGKYTLG YKTVLKTLRS SLGKLIILAN    50
    NCPPLRKSEI ETYAMLAKIS VHHFHGNNVD LGTACGKYYR VCCLSILDPG 100
    DSDIISTTTT TQ 112
    Length:112
    Mass (Da):12,275
    Last modified:July 25, 2006 - v2
    Checksum:i20A798FE5B5D58E9
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti42 – 421L → E in AAW50986. 1 PublicationCurated
    Sequence conflicti62 – 621T → C in AAW50986. 1 PublicationCurated
    Sequence conflicti106 – 1061S → N in AAW50986. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY846825 mRNA. Translation: AAW50986.1.
    UniGeneiTa.28375.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY846825 mRNA. Translation: AAW50986.1 .
    UniGenei Ta.28375.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1YSH electron microscopy 9.50 C 6-109 [» ]
    3J61 electron microscopy 5.50 c 1-112 [» ]
    ProteinModelPortali Q5I7K9.
    SMRi Q5I7K9. Positions 6-109.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q5I7K9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    Gramenei Q5I7K9.

    Miscellaneous databases

    EvolutionaryTracei Q5I7K9.

    Family and domain databases

    Gene3Di 3.30.1330.30. 1 hit.
    InterProi IPR029064. L30e-like.
    IPR000231. Ribosomal_L30e.
    IPR022991. Ribosomal_L30e_CS.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    [Graphical view ]
    PANTHERi PTHR11449. PTHR11449. 1 hit.
    Pfami PF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55315. SSF55315. 1 hit.
    PROSITEi PS00709. RIBOSOMAL_L30E_1. 1 hit.
    PS00993. RIBOSOMAL_L30E_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Isolation and characterization of 15 genes encoding ribosomal proteins in wheat (Triticum aestivum L.)."
      Yao Y.Y., Ni Z.F., Du J., Wang X., Wu H., Sun Q.X.
      Plant Sci. 170:579-586(2006)
      [AGRICOLA] [Europe PMC]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
    2. "Localization and dynamic behavior of ribosomal protein L30e."
      Halic M., Becker T., Frank J., Spahn C.M.T., Beckmann R.
      Nat. Struct. Mol. Biol. 12:467-468(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (9.5 ANGSTROMS) OF 6-109.

    Entry informationi

    Entry nameiRL30_WHEAT
    AccessioniPrimary (citable) accession number: Q5I7K9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 25, 2006
    Last sequence update: July 25, 2006
    Last modified: October 1, 2014
    This is version 40 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3