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Protein

UDP-N-acetylglucosamine transferase subunit ALG13 homolog

Gene

Alg13

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway.By similarity

Catalytic activityi

UDP-N-acetyl-D-glucosamine + N-acetyl-D-glucosaminyl-diphosphodolichol = UDP + N,N'-diacetylchitobiosyl-diphosphodolichol.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
UDP-N-acetylglucosamine transferase subunit ALG13 homolog (EC:2.4.1.141)
Alternative name(s):
Glycosyltransferase 28 domain-containing protein 1
Gene namesi
Name:Alg13
Synonyms:Glt28d1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1359416. Alg13.

Subcellular locationi

  • Endoplasmic reticulum By similarity

  • Note: Could be recruited to the cytosolic face of the endoplasmic reticulum membrane through its interaction with ALG14.By similarity

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002545751 – 165UDP-N-acetylglucosamine transferase subunit ALG13 homologAdd BLAST165

Proteomic databases

PaxDbiQ5I0K7.
PRIDEiQ5I0K7.

Expressioni

Gene expression databases

BgeeiENSRNOG00000005753.
ExpressionAtlasiQ5I0K7. baseline and differential.
GenevisibleiQ5I0K7. RN.

Interactioni

Subunit structurei

May interact with ALG14.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007969.

Structurei

3D structure databases

ProteinModelPortaliQ5I0K7.
SMRiQ5I0K7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 28 family.Curated

Phylogenomic databases

eggNOGiKOG3349. Eukaryota.
COG5017. LUCA.
GeneTreeiENSGT00510000047493.
HOGENOMiHOG000192807.
HOVERGENiHBG056051.
InParanoidiQ5I0K7.
KOiK07432.
OMAiNRKCTKL.
PhylomeDBiQ5I0K7.
TreeFamiTF313788.

Family and domain databases

InterProiIPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5I0K7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRAFVTVGT TSFDDLVARV VANDTVQILK SLGYNHLVLQ IGRGTVVPEP
60 70 80 90 100
FSTEPFTLDV YRYKESLKED LQQADLVISH AGAGSCLESL EKGKPLVVVV
110 120 130 140 150
NEKLMNNHQF ELAKQLHKEG HLFYCTCSML PGLLQSMDLS TLKCYPPGQP
160
EKFSAFLDKV VGLQK
Length:165
Mass (Da):18,329
Last modified:February 15, 2005 - v1
Checksum:i2BBFA7D967588B15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC088233 mRNA. Translation: AAH88233.1.
RefSeqiNP_001013973.1. NM_001013951.1.
UniGeneiRn.29819.

Genome annotation databases

EnsembliENSRNOT00000076680; ENSRNOP00000068463; ENSRNOG00000005753.
GeneIDi300284.
KEGGirno:300284.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC088233 mRNA. Translation: AAH88233.1.
RefSeqiNP_001013973.1. NM_001013951.1.
UniGeneiRn.29819.

3D structure databases

ProteinModelPortaliQ5I0K7.
SMRiQ5I0K7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007969.

Proteomic databases

PaxDbiQ5I0K7.
PRIDEiQ5I0K7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000076680; ENSRNOP00000068463; ENSRNOG00000005753.
GeneIDi300284.
KEGGirno:300284.

Organism-specific databases

CTDi79868.
RGDi1359416. Alg13.

Phylogenomic databases

eggNOGiKOG3349. Eukaryota.
COG5017. LUCA.
GeneTreeiENSGT00510000047493.
HOGENOMiHOG000192807.
HOVERGENiHBG056051.
InParanoidiQ5I0K7.
KOiK07432.
OMAiNRKCTKL.
PhylomeDBiQ5I0K7.
TreeFamiTF313788.

Miscellaneous databases

PROiQ5I0K7.

Gene expression databases

BgeeiENSRNOG00000005753.
ExpressionAtlasiQ5I0K7. baseline and differential.
GenevisibleiQ5I0K7. RN.

Family and domain databases

InterProiIPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiALG13_RAT
AccessioniPrimary (citable) accession number: Q5I0K7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: February 15, 2005
Last modified: November 30, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.