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Q5HWW2

- IF3_CAMJR

UniProt

Q5HWW2 - IF3_CAMJR

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Protein

Translation initiation factor IF-3

Gene

infC

Organism
Campylobacter jejuni (strain RM1221)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.UniRule annotation

GO - Molecular functioni

  1. translation initiation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciCJEJ195099:GJC0-205-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor IF-3UniRule annotation
Gene namesi
Name:infCUniRule annotation
Ordered Locus Names:CJE0200
OrganismiCampylobacter jejuni (strain RM1221)
Taxonomic identifieri195099 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeCampylobacter
ProteomesiUP000000436: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 172172Translation initiation factor IF-3PRO_0000177499Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi195099.CJE0200.

Structurei

Secondary structure

1
172
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi87 – 959Combined sources
Helixi98 – 11316Combined sources
Beta strandi117 – 1237Combined sources
Helixi127 – 1304Combined sources
Helixi133 – 14614Combined sources
Turni147 – 1493Combined sources
Beta strandi150 – 1523Combined sources
Beta strandi160 – 16910Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2M71NMR-A83-172[»]
ProteinModelPortaliQ5HWW2.
SMRiQ5HWW2. Positions 5-80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the IF-3 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0290.
HOGENOMiHOG000035157.
KOiK02520.
OMAiPRYNEFI.
OrthoDBiEOG63JRGJ.

Family and domain databases

Gene3Di3.10.20.80. 1 hit.
3.30.110.10. 1 hit.
HAMAPiMF_00080. IF_3.
InterProiIPR019813. Translation_initiation_fac3_CS.
IPR001288. Translation_initiation_fac_3.
IPR019815. Translation_initiation_fac_3_C.
IPR019814. Translation_initiation_fac_3_N.
[Graphical view]
PANTHERiPTHR10938. PTHR10938. 1 hit.
PfamiPF00707. IF3_C. 1 hit.
PF05198. IF3_N. 1 hit.
[Graphical view]
SUPFAMiSSF54364. SSF54364. 1 hit.
SSF55200. SSF55200. 1 hit.
TIGRFAMsiTIGR00168. infC. 1 hit.
PROSITEiPS00938. IF3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5HWW2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKEKEVLLN EEIRADEIRC VGDDGKVYGI ISSDEALEIA NRLGLDLVMI
60 70 80 90 100
AADAKPPVCK IMDYGKFRYQ QEKKQKEAKK KQKVIDIKEI KLSVKIAQND
110 120 130 140 150
INYKVKHALE FLEQGKHVRF RVFLKGREMA TPEAGVALLE KIWTMIENEA
160 170
NRDKEPNFEG RYVNMLVTPK KA
Length:172
Mass (Da):19,781
Last modified:February 15, 2005 - v1
Checksum:iE336083CDC1B87C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000025 Genomic DNA. Translation: AAW34794.1.
RefSeqiYP_178223.1. NC_003912.7.

Genome annotation databases

EnsemblBacteriaiAAW34794; AAW34794; CJE0200.
GeneIDi3230963.
KEGGicjr:CJE0200.
PATRICi20042112. VBICamJej134361_0205.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000025 Genomic DNA. Translation: AAW34794.1 .
RefSeqi YP_178223.1. NC_003912.7.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2M71 NMR - A 83-172 [» ]
ProteinModelPortali Q5HWW2.
SMRi Q5HWW2. Positions 5-80.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 195099.CJE0200.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAW34794 ; AAW34794 ; CJE0200 .
GeneIDi 3230963.
KEGGi cjr:CJE0200.
PATRICi 20042112. VBICamJej134361_0205.

Phylogenomic databases

eggNOGi COG0290.
HOGENOMi HOG000035157.
KOi K02520.
OMAi PRYNEFI.
OrthoDBi EOG63JRGJ.

Enzyme and pathway databases

BioCyci CJEJ195099:GJC0-205-MONOMER.

Family and domain databases

Gene3Di 3.10.20.80. 1 hit.
3.30.110.10. 1 hit.
HAMAPi MF_00080. IF_3.
InterProi IPR019813. Translation_initiation_fac3_CS.
IPR001288. Translation_initiation_fac_3.
IPR019815. Translation_initiation_fac_3_C.
IPR019814. Translation_initiation_fac_3_N.
[Graphical view ]
PANTHERi PTHR10938. PTHR10938. 1 hit.
Pfami PF00707. IF3_C. 1 hit.
PF05198. IF3_N. 1 hit.
[Graphical view ]
SUPFAMi SSF54364. SSF54364. 1 hit.
SSF55200. SSF55200. 1 hit.
TIGRFAMsi TIGR00168. infC. 1 hit.
PROSITEi PS00938. IF3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RM1221.

Entry informationi

Entry nameiIF3_CAMJR
AccessioniPrimary (citable) accession number: Q5HWW2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: February 15, 2005
Last modified: November 26, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3