Q5HV28 (Q5HV28_CAMJR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Arginine decarboxylase RuleBase RU003740
EC=4.1.1.19 RuleBase RU003740

Gene names

Name:	speA EMBL AAW35192.1
Ordered Locus Names:	CJE0855

Organism

Campylobacter jejuni (strain RM1221) [Complete proteome] [HAMAP] EMBL AAW35192.1

Taxonomic identifier

195099 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter › Campylobacter jejuni

Protein attributes

Sequence length	611 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-arginine = agmatine + CO2. RuleBase RU003740 SAAS SAAS022644
Cofactor	Magnesium By similarity. RuleBase RU003740 SAAS SAAS022644 Pyridoxal phosphate By similarity. SAAS SAAS022644
Sequence similarities	Belongs to the Orn/Lys/Arg decarboxylase class-II family.

Ontologies

Keywords
Biological process	Spermidine biosynthesis SAAS SAAS022644 RuleBase RU003740
Ligand	Magnesium SAAS SAAS022644 Pyridoxal phosphate SAAS SAAS022644
Molecular function	Decarboxylase SAAS SAAS022644 RuleBase RU003740 Lyase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	arginine catabolic process Inferred from electronic annotation. Source: InterPro spermidine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	arginine decarboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5HV28 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 54FA13CA714C510B	FASTA	611	69,406
	10 20 30 40 50 60 MMDYGIDIWG NENFIIKNGK VCINYEKKPA IIDIVKELRD DGYKGPLLLR FPHLIQKQIE 70 80 90 100 110 120 NIYGNFNKAR KEFGYKGGFN AVYPLKVNQY PGFVKNLVKL GKDYNYGLEA GSKAELLLAM 130 140 150 160 170 180 AYNNEGAPIT VNGFKDRELI NIGFIAAEMG HNITLTIEGL NELEAIIDIA KERFKPKPNI 190 200 210 220 230 240 GLRVRLHSAG VGIWAKSGGI NSKFGLTSTE LIEAVNLLKE NKLLEQFTMI HFHLGSQITE 250 260 270 280 290 300 IHPLKKALNE AGNIYTELRK MGAKNLKAIN LGGGLAVEYS QFKNEKSRNY TLREYANDVV 310 320 330 340 350 360 FILKNIAEQK KDLEPDIFIE SGRFVAANHA VLIAPVLELF SQEYTENKLI LKKQNPKLID 370 380 390 400 410 420 ELYDLYKSIK PSNALEYLHD SIDHLESILT LFDLGYVDLQ DRSNAEILTH LITKKAILLL 430 440 450 460 470 480 GDKQNPADLL AIQDEVQERY LVNFSLFQSM PDFWGLEQNF PIMPLDRLDE EPTRSASIWD 490 500 510 520 530 540 ITCDSDGEIS YSKDKPLFLH DVDVEKENYF LGFFLVGAYQ EVLGMKHNLF THPTEAIISI 550 560 570 580 590 600 NEKGYEVEGI IEAQSILDTL EDLDYDIHAI MDILNERISN SKLVNDKQKK HILGELYLFL 610 NDNGYLKSIG V

References

[1]

"Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species." Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., Ravel J., Brinkac L.M., DeBoy R.T., Parker C.T., Daugherty S.C., Dodson R.J., Durkin A.S., Madupu R., Sullivan S.A., Shetty J.U., Ayodeji M.A., Shvartsbeyn A., Schatz M.C. , Badger J.H., Fraser C.M., Nelson K.E. PLoS Biol. 3:72-85(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RM1221.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000025 Genomic DNA. Translation: AAW35192.1.
RefSeq	YP_178857.1. NC_003912.7.
3D structure databases
ProteinModelPortal	Q5HV28.
ModBase	Search...
Protein-protein interaction databases
STRING	195099.CJE0855.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAW35192; AAW35192; CJE0855.
GeneID	3231368.
KEGG	cjr:CJE0855.
PATRIC	20043477. VBICamJej134361_0868.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1166.
HOGENOM	HOG000029191.
KO	K01585.
OMA	MIHFHIG.
ProtClustDB	PRK05354.
Enzyme and pathway databases
BioCyc	CJEJ195099:GJC0-875-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 2 hits.
InterPro	IPR009006. Ala_racemase/Decarboxylase_C. IPR002985. Arg_decrbxlase. IPR022643. De-COase2_C. IPR022644. De-COase2_N. IPR022653. De-COase2_pyr-phos_BS. IPR000183. Orn/DAP/Arg_de-COase. [Graphical view]
PANTHER	PTHR11482:SF3. PTHR11482:SF3. 1 hit.
Pfam	PF02784. Orn_Arg_deC_N. 1 hit. PF00278. Orn_DAP_Arg_deC. 1 hit. [Graphical view]
PIRSF	PIRSF001336. Arg_decrbxlase. 1 hit.
PRINTS	PR01180. ARGDCRBXLASE. PR01179. ODADCRBXLASE.
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR01273. speA. 1 hit.
PROSITE	PS00878. ODR_DC_2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5HV28_CAMJR

Accession

Primary (citable) accession number: Q5HV28

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)