Q5HSC4 (Q5HSC4_CAMJR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase, ATP-dependent EMBL AAW36263.1
EC=6.5.1.1 EMBL AAW36263.1

Gene names

Ordered Locus Names:

CJE1841

Organism

Campylobacter jejuni (strain RM1221) [Complete proteome] [HAMAP] EMBL AAW36263.1

Taxonomic identifier

195099 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter › Campylobacter jejuni

Protein attributes

Sequence length	282 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AAW36263.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5HSC4 [UniParc]. Last modified February 15, 2005. Version 1. Checksum: 09CF886AA2B8D0BE	FASTA	282	32,440
	10 20 30 40 50 60 MRFVFLICCA CLVFANEILL LSKFDKQDFN SKDFNAYLMS EKLDGVRGIW DGKYLKTRQN 70 80 90 100 110 120 YKIKTPDFFT KNFPPFAIDG ELWIARNKFD EISALIRSGD SNLTLWKEVT YNIFDVPNAC 130 140 150 160 170 180 EEFQISTCTL KNCLAVLEEY LQKYPSAYIK IISQIPVENQ NNLNQFYESI IKNQGEGIVI 190 200 210 220 230 240 RKNLSPYEKG RSKNAMKLKP YDDAECELVG FRKGKGKFEN QVGALLCKMP NGQIIKIGSG 250 260 270 280 LKDEDRKNPP KIGSIVTYKF NGLTKNSLPR FPVFLRIRDE NP

References

[1]

"Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species." Fouts D.E., Mongodin E.F., Mandrell R.E., Miller W.G., Rasko D.A., Ravel J., Brinkac L.M., DeBoy R.T., Parker C.T., Daugherty S.C., Dodson R.J., Durkin A.S., Madupu R., Sullivan S.A., Shetty J.U., Ayodeji M.A., Shvartsbeyn A., Schatz M.C. , Badger J.H., Fraser C.M., Nelson K.E. PLoS Biol. 3:72-85(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RM1221.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000025 Genomic DNA. Translation: AAW36263.1.
RefSeq	YP_179811.1. NC_003912.7.
3D structure databases
ProteinModelPortal	Q5HSC4.
ModBase	Search...
Protein-protein interaction databases
STRING	195099.CJE1841.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAW36263; AAW36263; CJE1841.
GeneID	3232468.
KEGG	cjr:CJE1841.
PATRIC	20045514. VBICamJej134361_1859.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
ProtClustDB	PRK09125.
Enzyme and pathway databases
BioCyc	CJEJ195099:GJC0-1880-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00333. DNA_LIGASE_A2. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5HSC4_CAMJR

Accession

Primary (citable) accession number: Q5HSC4

Entry history

Integrated into UniProtKB/TrEMBL:	February 15, 2005
Last sequence update:	February 15, 2005
Last modified:	May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)